RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SRRTQ9BXP5 876 aaKnown RBP15.69■□□□□ 0.1
USB1-203ENST00000539737 PRDM16Q9HAZ2 1276 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 STARD13Q9Y3M8 1113 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 CABIN1Q9Y6J0 2220 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 URB1O60287 2271 aaKnown RBP15.68■□□□□ 0.1
USB1-203ENST00000539737 CBFA2T3O75081 653 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 KLKB1P03952 638 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 SYPP08247 313 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 NCAM1P13591 858 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 DGKGP49619 791 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 NDST1P52848 882 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 STX1AQ16623 288 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 DCAF12L1Q5VU92 463 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 HTR3DQ70Z44 454 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 ZNF366Q8N895 744 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 KIAA1958Q8N8K9 716 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 OVCA2Q8WZ82 227 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 OTUB2Q96DC9 234 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 FAXDC2Q96IV6 333 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 NIF3L1Q9GZT8 377 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 CCDC86Q9H6F5 360 aaKnown RBP15.68■□□□□ 0.1
USB1-203ENST00000539737 TOR4AQ9NXH8 423 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 PCOLCE2Q9UKZ9 415 aa15.68■□□□□ 0.1
USB1-203ENST00000539737 FAM92AA1XBS5 289 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 HHLA1C9JL84 531 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 H0Y626 953 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 TRIM16O95361 564 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 HLA-EP13747 358 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 PRKCHP24723 683 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 CD6P30203 668 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 CETN1Q12798 172 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 CBWD6Q4V339 395 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 CBWD3Q5JTY5 395 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 CBWD5Q5RIA9 395 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 SDE2Q6IQ49 451 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 TRIM59Q8IWR1 403 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 XPO6Q96QU8 1125 aaKnown RBP15.67■□□□□ 0.1
USB1-203ENST00000539737 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 GAREM1Q9H706 876 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 ANO10Q9NW15 660 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 RAB20Q9NX57 234 aa15.67■□□□□ 0.1
USB1-203ENST00000539737 WSB2Q9NYS7 404 aaPredicted RBP15.67■□□□□ 0.1
USB1-203ENST00000539737 EIF2B4Q9UI10 523 aaKnown RBP15.67■□□□□ 0.1
USB1-203ENST00000539737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.67■□□□□ 0.1
USB1-203ENST00000539737 A0A1B0GVT2 93 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 PMM2O15305 246 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 P4HA2O15460 535 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 CILPO75339 1184 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 ZNF217O75362 1048 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 PRB1P04280 392 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 RARGP13631 454 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 ACO1P21399 889 aaKnown RBP15.66■□□□□ 0.1
USB1-203ENST00000539737 DPP6P42658 865 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 ASPAP45381 313 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 FMO5P49326 533 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 TUBP50607 506 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 IL9RQ01113 521 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 KLHL40Q2TBA0 621 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 CAVIN1Q6NZI2 390 aaKnown RBP15.66■□□□□ 0.1
USB1-203ENST00000539737 CLEC20AQ6ZU45 233 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 SCD5Q86SK9 330 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 UNC93AQ86WB7 457 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 SNX19Q92543 992 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 CYP3A43Q9HB55 503 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 MARK1Q9P0L2 795 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.66■□□□□ 0.1
USB1-203ENST00000539737 COQ4Q9Y3A0 265 aa15.66■□□□□ 0.1
USB1-203ENST00000539737 HELZ2Q9BYK8 2649 aaKnown RBP15.66■□□□□ 0.1
USB1-203ENST00000539737 STC2O76061 302 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 CSNK1EP49674 416 aaKnown RBP15.65■□□□□ 0.1
USB1-203ENST00000539737 TPMTP51580 245 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 MFAP3P55082 362 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 CYP4F3Q08477 520 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 HLA-BQ31612 363 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 KCNT1Q5JUK3 1230 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 C10orf120Q5SQS8 335 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 TMEM215Q68D42 235 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 Q6ZNB5 142 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 TTC39CQ8N584 583 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 NDRG1Q92597 394 aaKnown RBP15.65■□□□□ 0.1
USB1-203ENST00000539737 MED15Q96RN5 788 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 FAM124BQ9H5Z6 455 aaPredicted RBP15.65■□□□□ 0.1
USB1-203ENST00000539737 APOBEC3GQ9HC16 384 aaKnown RBP15.65■□□□□ 0.1
USB1-203ENST00000539737 CYLDQ9NQC7 956 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 TLR8Q9NR97 1041 aaKnown RBP15.65■□□□□ 0.1
USB1-203ENST00000539737 COMMD8Q9NX08 183 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 USP36Q9P275 1121 aaKnown RBP15.65■□□□□ 0.1
USB1-203ENST00000539737 RASAL2Q9UJF2 1139 aa15.65■□□□□ 0.1
USB1-203ENST00000539737 FLNBO75369 2602 aaKnown RBP15.64■□□□□ 0.1
USB1-203ENST00000539737 A0A1B0GTW7 788 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 ZBTB24O43167 697 aaPredicted RBP15.64■□□□□ 0.09
USB1-203ENST00000539737 AFPP02771 609 aaKnown RBP15.64■□□□□ 0.09
USB1-203ENST00000539737 RDXP35241 583 aaKnown RBP15.64■□□□□ 0.09
USB1-203ENST00000539737 ATP5C1P36542 298 aaKnown RBP15.64■□□□□ 0.09
USB1-203ENST00000539737 COPAP53621 1224 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 INCA1Q0VD86 236 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 CKAP5Q14008 2032 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms