RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IFT122Q9HBG6 1241 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 DNAJC28Q9NX36 388 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 TSPAN16Q9UKR8 245 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 TBC1D30Q9Y2I9 924 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 UTRNP46939 3433 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 MEI4A8MW99 385 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SIN3BO75182 1162 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 LYPLA1O75608 230 aaPredicted RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 MAP3K6O95382 1288 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 STAU1O95793 577 aaKnown RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 TOP3BO95985 862 aaKnown RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 MCF2P10911 925 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ALOX15P16050 662 aaPredicted RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 IDH3AP50213 366 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 CDK7P50613 346 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NDST1P52848 882 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 COPAP53621 1224 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 RPL26P61254 145 aaKnown RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 IRX4P78413 519 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 TNFAIP2Q03169 654 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NIPAL4Q0D2K0 466 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NAB1Q13506 487 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 PDE1CQ14123 709 aaPredicted RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 INSCQ1MX18 579 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 C16orf46Q6P387 395 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 OLFML1Q6UWY5 402 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 RAPH1Q70E73 1250 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 OR6Y1Q8NGX8 325 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ACTRT2Q8TDY3 377 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 LRRN4Q8WUT4 740 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 JADE3Q92613 823 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ATP2A3Q93084 1043 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NLRP4Q96MN2 994 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 QKIQ96PU8 341 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDH13-204ENST00000539548 GPR20Q99678 358 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NT5C1AQ9BXI3 368 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 MINDY3Q9H8M7 445 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 STK32BQ9NY57 414 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SLC4A7Q9Y6M7 1214 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 RNASEH1O60930 286 aaKnown RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 RTN3O95197 1032 aaPredicted RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 ALDOAP04075 364 aaKnown RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 SETSIPP0DME0 302 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 DESP17661 470 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 GRIA1P42261 906 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 ERFP50548 548 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 HDAC4P56524 1084 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 RPL10AP62906 217 aaKnown RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 GBE1Q04446 702 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 ASPHQ12797 758 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 DYNC1I2Q13409 638 aaKnown RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 CCNIQ14094 377 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 PCLAFQ15004 111 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 LY6KQ17RY6 165 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 PPP6R3Q5H9R7 873 aaPredicted RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 RALGPS1Q5JS13 557 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 KCNT2Q6UVM3 1135 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 PACS1Q6VY07 963 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 RNF111Q6ZNA4 994 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 SAMD7Q7Z3H4 446 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 TMEM110Q86TL2 294 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 RASSF3Q86WH2 238 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 CCDC33Q8N5R6 958 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDH13-204ENST00000539548 JDP2Q8WYK2 163 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 ZNF668Q96K58 619 aaPredicted RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 SORT1Q99523 831 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 NFKBIZQ9BYH8 718 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 KLHL4Q9C0H6 718 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 EBF3Q9H4W6 596 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 DMAP1Q9NPF5 467 aaPredicted RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 XPNPEP3Q9NQH7 507 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 PRMT7Q9NVM4 692 aaPredicted RBP9.96□□□□□ -0.82
CDH13-204ENST00000539548 BTBD7Q9P203 1132 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 GTF2IRD1Q9UHL9 959 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 TRIP11Q15643 1979 aa9.96□□□□□ -0.82
CDH13-204ENST00000539548 EVPLQ92817 2033 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 WDR27A2RRH5 827 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 KLHL33A6NCF5 533 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 ZNF195O14628 629 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 PROCP04070 461 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 PRKCGP05129 697 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 GJB1P08034 283 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 IQCF3P0C7M6 154 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 UQCRBP14927 111 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 KCNA4P22459 653 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 GSTT1P30711 240 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 FDFT1P37268 417 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 PTPN9P43378 593 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 HARS2P49590 506 aaKnown RBP9.95□□□□□ -0.82
CDH13-204ENST00000539548 RGS7P49802 495 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 RBP5P82980 135 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 DPYSL2Q16555 572 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 FAM187BQ17R55 369 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 GOLGA7BQ2TAP0 167 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 CNPY1Q3B7I2 92 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 SLC10A6Q3KNW5 377 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 LIN52Q52LA3 116 aa9.95□□□□□ -0.82
CDH13-204ENST00000539548 EFCAB12Q6NXP0 572 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms