RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMPRSS4Q9NRS4 437 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 PIGVQ9NUD9 493 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 MARK1Q9P0L2 795 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 STOML2Q9UJZ1 356 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 MRPS17Q9Y2R5 130 aaKnown RBP16.38■□□□□ 0.21
RPAIN-206ENST00000539417 ATG2BQ96BY7 2078 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 K7EQS6 105 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 M0QYT0 321 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 ACSL4O60488 711 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 TULP3O75386 442 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 CHRM1P11229 460 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-206ENST00000539417 RRM1P23921 792 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 SULT1E1P49888 294 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 C15orf59Q2T9L4 293 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-206ENST00000539417 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
RPAIN-206ENST00000539417 TMC6Q7Z403 805 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 CPXM2Q8N436 756 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 MSANTD4Q8NCY6 345 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 PRICKLE1Q96MT3 831 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-206ENST00000539417 TRIM62Q9BVG3 475 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 ZDHHC4Q9NPG8 344 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 ZNF510Q9Y2H8 683 aa16.37■□□□□ 0.21
RPAIN-206ENST00000539417 KCNU1A8MYU2 1149 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 ADCY5O95622 1261 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 PENKP01210 267 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-206ENST00000539417 SERPING1P05155 500 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 COL9A1P20849 921 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 RFC1P35251 1148 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-206ENST00000539417 GGCXP38435 758 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 ZNF75DP51815 510 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-206ENST00000539417 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
RPAIN-206ENST00000539417 MTAPQ13126 283 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 NNTQ13423 1086 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 CCDC14Q49A88 953 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 PPP1R15BQ5SWA1 713 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 ADGRF1Q5T601 910 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 NUGGCQ68CJ6 796 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 BNIPLQ7Z465 357 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 MAML2Q8IZL2 1156 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-206ENST00000539417 RXFP2Q8WXD0 754 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 CHRDQ9H2X0 955 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 ADAMTS1Q9UHI8 967 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
RPAIN-206ENST00000539417 A0A087X0T9 212 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 C2CD4BA6NLJ0 364 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 CACNG3O60359 315 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 MFAP3LO75121 409 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 FTLP02792 175 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 CISD3P0C7P0 127 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 FAM228BP0C875 321 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 CHKAP35790 457 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 RPS9P46781 194 aaKnown RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 SEC13P55735 322 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 RPL7AP62424 266 aaKnown RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 ATP11AP98196 1134 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 OGDHQ02218 1023 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 GRSF1Q12849 480 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 TCF15Q12870 199 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 SLC25A52Q3SY17 297 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 EMC10Q5UCC4 262 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 RAP1GAP2Q684P5 730 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 UNC45BQ8IWX7 931 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 PNKPQ96T60 521 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 DNAJC7Q99615 494 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 CHP1Q99653 195 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 ARHGEF4Q9NR80 690 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 DMDP11532 3685 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 GALR2O43603 387 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 RNF40O75150 1001 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 KAT7O95251 611 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 LATS1O95835 1130 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 CALB1P05937 261 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 KRT3P12035 628 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 HOXD9P28356 352 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 AMPD2Q01433 879 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 ARTNQ5T4W7 220 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 PIK3R6Q5UE93 754 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 C1orf228Q6PIY5 440 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 WFDC5Q8TCV5 224 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 DDI1Q8WTU0 396 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 AZIN2Q96A70 460 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPAIN-206ENST00000539417 SELENOOQ9BVL4 669 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 MAGEB5Q9BZ81 275 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 TRIM7Q9C029 511 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 WDR35Q9P2L0 1181 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 FBXO10Q9UK96 956 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 NENFQ9UMX5 172 aa16.35■□□□□ 0.21
RPAIN-206ENST00000539417 VPS13AQ96RL7 3174 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 NCAM2O15394 837 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 GZMAP12544 262 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms