RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 SQORQ9Y6N5 450 aa7.04□□□□□ -1.28
SCAPER-203ENST00000538941 IGLV3-22A0A075B6J6 115 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 TMEM114B3SHH9 223 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 POLRMTO00411 1230 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 WDR46O15213 610 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 MAN1A2O60476 641 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 CHEK2O96017 543 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 DLDP09622 509 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 PABPC4LP0CB38 370 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 MMP8P22894 467 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 RBL1P28749 1068 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 EIF2B2P49770 351 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SOX10P56693 466 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GPX6P59796 221 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 HPCAP84074 193 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 MTMR2Q13614 643 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 PDK1Q15118 436 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ARL13BQ3SXY8 428 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 KCTD21Q4G0X4 260 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SEZ6Q53EL9 994 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 KLHDC10Q6PID8 442 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 LAYNQ6UX15 382 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 STRA8Q7Z7C7 330 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ZSWIM2Q8NEG5 633 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GIPC3Q8TF64 312 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GATA6Q92908 595 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 LENG9Q96B70 501 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 MASTLQ96GX5 879 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 DNAJC1Q96KC8 554 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 CPNE1Q99829 537 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 CCDC90BQ9GZT6 254 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SEMA6AQ9H2E6 1030 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SYNPO2Q9UMS6 1093 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GNEQ9Y223 722 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 POMPQ9Y244 141 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 COQ4Q9Y3A0 265 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 CCDC88AQ3V6T2 1871 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 KPNA4O00629 521 aaPredicted RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 AVILO75366 819 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 FAM155BO75949 473 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 IL18RAPO95256 599 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 NR3C2P08235 984 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 IVDP26440 423 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 DPYSQ14117 519 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 RALGPS1Q5JS13 557 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 CHADLQ6NUI6 762 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 NPNTQ6UXI9 565 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SAMD3Q8N6K7 520 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 RXFP2Q8WXD0 754 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 UBE2OQ9C0C9 1292 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 LRRC40Q9H9A6 602 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GPATCH2LQ9NWQ4 482 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 STAP1Q9ULZ2 295 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GINS2Q9Y248 185 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 CFAP99D6REC4 459 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 GM2AP17900 193 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 DSG3P32926 999 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SNRNP48Q6IEG0 339 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ZDHHC14Q8IZN3 488 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 AHI1Q8N157 1196 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 LMO3Q8TAP4 145 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ACER1Q8TDN7 264 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ACTRT2Q8TDY3 377 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 VPS50Q96JG6 964 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 EBNA1BP2Q99848 306 aaKnown RBP7.03□□□□□ -1.28
SCAPER-203ENST00000538941 SYT11Q9BT88 431 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ZC4H2Q9NQZ6 224 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ATAD3AQ9NVI7 634 aa7.03□□□□□ -1.28
SCAPER-203ENST00000538941 ZNF839A8K0R7 811 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 BCL10O95999 233 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 ALBP02768 609 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 RPS6P62753 249 aaKnown RBP7.02□□□□□ -1.28
SCAPER-203ENST00000538941 IL1RL1Q01638 556 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 DLG1Q12959 904 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 KLF1Q13351 362 aaPredicted RBP7.02□□□□□ -1.28
SCAPER-203ENST00000538941 ZC3H12AQ5D1E8 599 aaKnown RBP7.02□□□□□ -1.28
SCAPER-203ENST00000538941 KRT27Q7Z3Y8 459 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 UBE2Q1Q7Z7E8 422 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 ADGRG6Q86SQ4 1221 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 ADCK1Q86TW2 530 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 NAT8LQ8N9F0 302 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 RNF149Q8NC42 400 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.28
SCAPER-203ENST00000538941 NRG4Q8WWG1 115 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 EXT2Q93063 718 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 BORCS5Q969J3 196 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 TBCBQ99426 244 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 KRT82Q9NSB4 513 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 PNPOQ9NVS9 261 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 PACSIN3Q9UKS6 424 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 BAG5Q9UL15 447 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 MYPNQ86TC9 1320 aa7.02□□□□□ -1.28
SCAPER-203ENST00000538941 SAC3D1A6NKF1 404 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 TRIM38O00635 465 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 LYPLA2O95372 231 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 OATP04181 439 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 VDRP11473 427 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 CCDC130P13994 396 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 PIK3R1P27986 724 aa7.02□□□□□ -1.29
SCAPER-203ENST00000538941 RPL14P50914 215 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms