RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PDK1Q15118 436 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 PRKD1Q15139 912 aaPredicted RBP15.31■□□□□ 0.04
ATL3-203ENST00000538786 CAPN12Q6ZSI9 719 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 TADA2BQ86TJ2 420 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 XPO6Q96QU8 1125 aaKnown RBP15.31■□□□□ 0.04
ATL3-203ENST00000538786 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 ETNK1Q9HBU6 452 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 PPANQ9NQ55 473 aaKnown RBP15.31■□□□□ 0.04
ATL3-203ENST00000538786 TBK1Q9UHD2 729 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 SLC24A2Q9UI40 661 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 ACTL7BQ9Y614 415 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 GMNCA6NCL1 334 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 FAM72CH0Y354 149 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 ZNF189O75820 626 aaPredicted RBP15.3■□□□□ 0.04
ATL3-203ENST00000538786 ATP2A2P16615 1042 aaKnown RBP15.3■□□□□ 0.04
ATL3-203ENST00000538786 SEC24CP53992 1094 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 YWHAGP61981 247 aaKnown RBP eCLIP15.3■□□□□ 0.04
ATL3-203ENST00000538786 NFE2Q16621 373 aaPredicted RBP15.3■□□□□ 0.04
ATL3-203ENST00000538786 FAM72AQ5TYM5 149 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 FAM72DQ6L9T8 149 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 FOXR1Q6PIV2 292 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 ARHGEF18Q6ZSZ5 1173 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 C3orf62Q6ZUJ4 267 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 PDZD4Q76G19 769 aaPredicted RBP15.3■□□□□ 0.04
ATL3-203ENST00000538786 TAC4Q86UU9 113 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 NLRP14Q86W24 1093 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 FAM72BQ86X60 149 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 PALM2Q8IXS6 379 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 CCDC33Q8N5R6 958 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 MCUQ8NE86 351 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 DQX1Q8TE96 717 aaKnown RBP15.3■□□□□ 0.04
ATL3-203ENST00000538786 MAML1Q92585 1016 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 FUBP3Q96I24 572 aaKnown RBP eCLIP15.3■□□□□ 0.04
ATL3-203ENST00000538786 CASD1Q96PB1 797 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 LGMNQ99538 433 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 ABCC13Q9NSE7 274 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 ADAM28Q9UKQ2 775 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 RAD54BQ9Y620 910 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 TEX264Q9Y6I9 313 aa15.3■□□□□ 0.04
ATL3-203ENST00000538786 A0A0A0MRY4 1105 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 METTL18O95568 372 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 FAM107AO95990 144 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 IGLV3-25P01717 112 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 AMHP03971 560 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 APRTP07741 180 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 VAV1P15498 845 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 TPSB2P20231 275 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 SSTR1P30872 391 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ELK3P41970 407 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 GLUD2P49448 558 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 GEMIN4P57678 1058 aaKnown RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 TPI1P60174 286 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 HTRA3P83110 453 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 TPSAB1Q15661 275 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 VARS2Q5ST30 1063 aaKnown RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 SYCP2LQ5T4T6 812 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 FAXCQ5TGI0 409 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 SPATA13Q96N96 652 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 DEFB118Q96PH6 123 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 TKTL2Q9H0I9 626 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ACSS3Q9H6R3 686 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 INTS9Q9NV88 658 aaKnown RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 ABI2Q9NYB9 513 aaPredicted RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 POC1B-GALNT4F8VUJ3 575 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ERCC2P18074 760 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 MTM1Q13496 603 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 EIF4EBP2Q13542 120 aaPredicted RBP15.29■□□□□ 0.04
ATL3-203ENST00000538786 SEMA5AQ13591 1074 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 KLHL38Q2WGJ6 581 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ANKRD20A2Q5SQ80 823 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 FAM182AQ5T1J6 154 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ANKRD20A1Q5TYW2 823 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 ANKRD20A3Q5VUR7 823 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 VSTM1Q6UX27 236 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 C8orf48Q96LL4 319 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 CCT8L2Q96SF2 557 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 EPAS1Q99814 870 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 LRFN2Q9ULH4 789 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 CHMP2BQ9UQN3 213 aa15.29■□□□□ 0.04
ATL3-203ENST00000538786 TMEM120BA0PK00 339 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 NCAM2O15394 837 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 HOXA2O43364 376 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 SPAG6O75602 509 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 BRAFP15056 766 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 CCT5P48643 541 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
ATL3-203ENST00000538786 TMED2Q15363 201 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 BTBD8Q5XKL5 378 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 CAND1Q86VP6 1230 aaKnown RBP15.28■□□□□ 0.04
ATL3-203ENST00000538786 IGDCC3Q8IVU1 814 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 SCN4BQ8IWT1 228 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 CRIPAKQ8N1N5 446 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 FBF1Q8TES7 1133 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 P2RY11Q96G91 374 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms