RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ERVK-9P63128 1117 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 CDK20Q8IZL9 346 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 AKAP7Q9P0M2 348 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-205ENST00000538291 TRHDEQ9UKU6 1024 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-205ENST00000538291 O00370 1275 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 CABYRO75952 493 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 ALDH9A1P49189 494 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 IKBKEQ14164 716 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 ARHGAP17Q68EM7 881 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 FGD2Q7Z6J4 655 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 LRRC34Q8IZ02 419 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 TATDN2Q93075 761 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 MPOP05164 745 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 IRAK1P51617 712 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF571Q7Z3V5 609 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-205ENST00000538291 RSPH1Q8WYR4 309 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 SLC24A3Q9HC58 644 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 E9PBE3 544 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 FNDC3BQ53EP0 1204 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 IL25Q9H293 177 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 PCDH9Q9HC56 1237 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 SEPT3Q9UH03 358 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 FAM205AQ6ZU69 1335 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 SLC2A4P14672 509 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 TOB1P50616 345 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 C16orf72Q14CZ0 275 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 MCOLN2Q8IZK6 566 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 MCOLN3Q8TDD5 553 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 TRIM66O15016 1216 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 POLR2LP62875 67 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 MAD2L1Q13257 205 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 BOP1Q14137 746 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 SLC39A12Q504Y0 691 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 VN1R5Q7Z5H4 357 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 VPS33AQ96AX1 596 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 MTA2O94776 668 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 EIF2S1P05198 315 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 ATP5BP06576 529 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 HNRNPCP07910 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 ITGB6P18564 788 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 BCL2L1Q07817 233 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 PABPC1LQ4VXU2 614 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 ATAD3BQ5T9A4 648 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 TMEM154Q6P9G4 183 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 CDC42EP4Q9H3Q1 356 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 PAEPP09466 180 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 SKP1P63208 163 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF786Q8N393 782 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 DPP10Q8N608 796 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 TRAPPC12Q8WVT3 735 aa17.22■□□□□ 0.35
SCARB1-205ENST00000538291 AHCYL2Q96HN2 611 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 TDRKHQ9Y2W6 561 aaKnown RBP17.22■□□□□ 0.35
SCARB1-205ENST00000538291 E9PCH4 1651 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 LACTBL1A8MY62 500 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 KPNA3O00505 521 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-205ENST00000538291 MICAL2O94851 1124 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 CLTBP09497 229 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 PSMC6P62333 389 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 PKN1Q16512 942 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
SCARB1-205ENST00000538291 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
SCARB1-205ENST00000538291 SLC2A14Q8TDB8 520 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 DEPDC7Q96QD5 511 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 NDOR1Q9UHB4 597 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 VHLP40337 213 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 NPY2RP49146 381 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 AQP5P55064 265 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 NCF4Q15080 339 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 TMEM86AQ8N2M4 240 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 SUSD6Q92537 303 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 PPP1R14AQ96A00 147 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 MAGED4Q96JG8 741 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 SMAD5Q99717 465 aaKnown RBP17.21■□□□□ 0.35
SCARB1-205ENST00000538291 DPY30Q9C005 99 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 TAS2R13Q9NYV9 303 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 SH3BP4Q9P0V3 963 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 CAPN6Q9Y6Q1 641 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 GCNT1Q02742 428 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 ADGRA1Q86SQ6 560 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 HTR3CQ8WXA8 447 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 SNX8Q9Y5X2 465 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
SCARB1-205ENST00000538291 MSCO60682 206 aa17.21■□□□□ 0.34
SCARB1-205ENST00000538291 POLR2EP19388 210 aaKnown RBP17.21■□□□□ 0.34
SCARB1-205ENST00000538291 ATP6V1B2P21281 511 aa17.21■□□□□ 0.34
SCARB1-205ENST00000538291 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.21■□□□□ 0.342e-8■□□□□ 10.3
SCARB1-205ENST00000538291 SLC5A5Q92911 643 aa17.21■□□□□ 0.34
SCARB1-205ENST00000538291 REPS1Q96D71 796 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms