RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 TIMM44O43615 452 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 TSPAN3O60637 253 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 LATS1O95835 1130 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 EPHX1P07099 455 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 PAEPP09466 180 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 ACADMP11310 421 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 LCP1P13796 627 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 SPINK2P20155 84 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 HOXD9P28356 352 aaPredicted RBP10.11□□□□□ -0.79
CHD4-207ENST00000537634 PPP1R2P41236 205 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 CETN1Q12798 172 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 SEMA3BQ13214 749 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 ENPP2Q13822 863 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 TMEM270Q6UE05 265 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 UNQ6494/PRO21346Q6UXR6 183 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 CACUL1Q86Y37 369 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 PPM1KQ8N3J5 372 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 UBR7Q8N806 425 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 ENGASEQ8NFI3 743 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 SPATA20Q8TB22 786 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 SORCS1Q8WY21 1168 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 KCTD13Q8WZ19 329 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 PRCCQ92733 491 aaPredicted RBP10.11□□□□□ -0.79
CHD4-207ENST00000537634 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 TOE1Q96GM8 510 aaKnown RBP10.11□□□□□ -0.79
CHD4-207ENST00000537634 DHTKD1Q96HY7 919 aaPredicted RBP10.11□□□□□ -0.79
CHD4-207ENST00000537634 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 TIGD1Q96MW7 591 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 ADAM33Q9BZ11 813 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 MKRN2Q9H000 416 aaKnown RBP10.11□□□□□ -0.79
CHD4-207ENST00000537634 CNGB3Q9NQW8 809 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 ABCC13Q9NSE7 274 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 USP36Q9P275 1121 aaKnown RBP10.11□□□□□ -0.79
CHD4-207ENST00000537634 SFMBT1Q9UHJ3 866 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 CLEC4EQ9ULY5 219 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 PCDHB4Q9Y5E5 795 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 SPAARA0A1B0GVQ0 90 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 C1QTNF9BB2RNN3 333 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 M0QYV0 167 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 MSI1O43347 362 aaKnown RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 PROS1P07225 676 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 C1QTNF9P0C862 333 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 NCAM1P13591 858 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 PRKCHP24723 683 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 MAOBP27338 520 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 OXTRP30559 389 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 RGS7P49802 495 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 TPMTP51580 245 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 DAOAP59103 153 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 NUCB2P80303 420 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 SIM1P81133 766 aaPredicted RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 STILQ15468 1287 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 ADGRF1Q5T601 910 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 ISM2Q6H9L7 571 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 KLHL10Q6JEL2 608 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 LCLAT1Q6UWP7 414 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 PIP4P1Q86T03 277 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 SCML4Q8N228 414 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 CADM4Q8NFZ8 388 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 OR2I1PQ8NGU4 316 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 WFIKKN2Q8TEU8 576 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 TFAP2BQ92481 460 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 GOLGA1Q92805 767 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 SCNM1Q9BWG6 230 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 GPR174Q9BXC1 333 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 ITM2CQ9NQX7 267 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 DNAAF2Q9NVR5 837 aaKnown RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 WSB2Q9NYS7 404 aaPredicted RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHD4-207ENST00000537634 WASF3Q9UPY6 502 aa10.1□□□□□ -0.79
CHD4-207ENST00000537634 MUC22E2RYF6 1773 aaPredicted RBP10.1□□□□□ -0.79
CHD4-207ENST00000537634 CACNA1EQ15878 2313 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 A0A1B0GTW7 788 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 KCNJ18B7U540 433 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 PIK3R2O00459 728 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 PMM2O15305 246 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 TOP3BO95985 862 aaKnown RBP10.09□□□□□ -0.79
CHD4-207ENST00000537634 LTFP02788 710 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
CHD4-207ENST00000537634 HLA-FP30511 346 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 RDXP35241 583 aaKnown RBP10.09□□□□□ -0.79
CHD4-207ENST00000537634 SLC11A2P49281 568 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 COPAP53621 1224 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 HNRNPDQ14103 355 aaKnown RBP10.09□□□□□ -0.79
CHD4-207ENST00000537634 CNGA2Q16280 664 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 NUGGCQ68CJ6 796 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 TMEM215Q68D42 235 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 PMF1Q6P1K2 205 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 MSANTD2Q6P1R3 559 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 CHST9Q7L1S5 443 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 UNC45BQ8IWX7 931 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 AHI1Q8N157 1196 aa10.09□□□□□ -0.79
CHD4-207ENST00000537634 ZCCHC9Q8N567 271 aaKnown RBP10.09□□□□□ -0.79
CHD4-207ENST00000537634 RBBP8NLQ8NC74 664 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms