RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 DNAJB4Q9UDY4 337 aa18.05■□□□□ 0.48
SNX17-210ENST00000537606 GGT7Q9UJ14 662 aa18.05■□□□□ 0.48
SNX17-210ENST00000537606 KBTBD13C9JR72 458 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 EEF2KO00418 725 aaKnown RBP18.04■□□□□ 0.48
SNX17-210ENST00000537606 STX2P32856 288 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 OR1G1P47890 313 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 AP1B1Q10567 949 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 CCNYQ8ND76 341 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 TFB1MQ8WVM0 346 aaKnown RBP18.04■□□□□ 0.48
SNX17-210ENST00000537606 CKAP2Q8WWK9 683 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 SUSD3Q96L08 255 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 PKMYT1Q99640 499 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 H3BRJ5 948 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 GRIA1P42261 906 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 WDR4P57081 412 aaKnown RBP18.04■□□□□ 0.48
SNX17-210ENST00000537606 YWHAGP61981 247 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX17-210ENST00000537606 YWHAHQ04917 246 aaPredicted RBP18.04■□□□□ 0.48
SNX17-210ENST00000537606 THEM5Q8N1Q8 247 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 PXYLP1Q8TE99 480 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 CFAP36Q96G28 342 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 QKIQ96PU8 341 aaKnown RBP eCLIP18.04■□□□□ 0.489e-9■■□□□ 14.4
SNX17-210ENST00000537606 TRIM56Q9BRZ2 755 aaKnown RBP18.04■□□□□ 0.48
SNX17-210ENST00000537606 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 SAMD15Q9P1V8 674 aa18.04■□□□□ 0.48
SNX17-210ENST00000537606 DGKIO75912 1065 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 PHBP35232 272 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 GEMIN4P57678 1058 aaKnown RBP18.03■□□□□ 0.48
SNX17-210ENST00000537606 XRCC4Q13426 336 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 DENND5BQ6ZUT9 1274 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 RFX8Q6ZV50 586 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 CAND1Q86VP6 1230 aaKnown RBP18.03■□□□□ 0.48
SNX17-210ENST00000537606 HTR3CQ8WXA8 447 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 TRABDQ9H4I3 376 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 DMAP1Q9NPF5 467 aaPredicted RBP18.03■□□□□ 0.48
SNX17-210ENST00000537606 NKIRAS1Q9NYS0 192 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 TEX264Q9Y6I9 313 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 FOXN2P32314 431 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 PGFP49763 221 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 TSPY1Q01534 308 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 NOMO2Q5JPE7 1267 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 SH3TC2Q8TF17 1288 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 CCT6BQ92526 530 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 UROC1Q96N76 676 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 OLFM3Q96PB7 478 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 TGS1Q96RS0 853 aaKnown RBP18.03■□□□□ 0.48
SNX17-210ENST00000537606 COLEC11Q9BWP8 271 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 FBXW11Q9UKB1 542 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 NUDT5Q9UKK9 219 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 DSEQ9UL01 958 aa18.03■□□□□ 0.48
SNX17-210ENST00000537606 MRPL42Q9Y6G3 142 aaKnown RBP18.03■□□□□ 0.48
SNX17-210ENST00000537606 TSC2P49815 1807 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 SMAPO00193 183 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 GCATO75600 419 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 GRIK1P39086 918 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 SDHAF4Q5VUM1 108 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 ARHGEF18Q6ZSZ5 1173 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 TDRPQ86YL5 185 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.48
SNX17-210ENST00000537606 RIBC1Q8N443 379 aaPredicted RBP18.02■□□□□ 0.48
SNX17-210ENST00000537606 PAFAH2Q99487 392 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 TKTL2Q9H0I9 626 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 PRDM12Q9H4Q4 367 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 WDCPQ9H6R7 721 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 TBC1D13Q9NVG8 400 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 PIH1D1Q9NWS0 290 aaKnown RBP18.02■□□□□ 0.48
SNX17-210ENST00000537606 SQORQ9Y6N5 450 aa18.02■□□□□ 0.48
SNX17-210ENST00000537606 TCRBV9S1A1TA0A576 114 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 FAM47DPA6NHR8 397 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 SNX3O60493 162 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 ERCC2P18074 760 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 SLC39A12Q504Y0 691 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 ANKRD20A2Q5SQ80 823 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 ANKRD20A1Q5TYW2 823 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 ANKRD20A3Q5VUR7 823 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 TAC4Q86UU9 113 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 SPATA2LQ8IUW3 424 aaPredicted RBP18.02■□□□□ 0.47
SNX17-210ENST00000537606 SCN4BQ8IWT1 228 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 SPOCK2Q92563 424 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 RNF34Q969K3 372 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 P2RY11Q96G91 374 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 ACSS3Q9H6R3 686 aa18.02■□□□□ 0.47
SNX17-210ENST00000537606 RCOR3Q9P2K3 495 aaPredicted RBP18.02■□□□□ 0.47
SNX17-210ENST00000537606 PSMC3IPQ9P2W1 217 aaPredicted RBP18.02■□□□□ 0.47
SNX17-210ENST00000537606 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.02■□□□□ 0.47
SNX17-210ENST00000537606 H0YHG0 523 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 FSBPO95073 299 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 EOMESO95936 686 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 GRK4P32298 578 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 RPA3P35244 121 aaPredicted RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 GATMP50440 423 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 ACTN3Q08043 901 aaPredicted RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 DPYSQ14117 519 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 TTC31Q49AM3 519 aaPredicted RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 PRPF39Q86UA1 669 aaKnown RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 MPP5Q8N3R9 675 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 ZNF296Q8WUU4 475 aaPredicted RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 B3GALT6Q96L58 329 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms