RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 PAGE1O75459 146 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CKMP06732 381 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 KRT10P13645 584 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 KDELR1P24390 212 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 L1CAMP32004 1257 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CCR1P32246 355 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CDH6P55285 790 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 ADCY2Q08462 1091 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 PPP6R3Q5H9R7 873 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 ADAT2Q7Z6V5 191 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 GPR149Q86SP6 731 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CREG2Q8IUH2 290 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CCDC50Q8IVM0 306 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 KCTD6Q8NC69 237 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 EXD1Q8NHP7 514 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 TEKT4Q8WW24 435 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 NTAN1Q96AB6 310 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CDK5RAP1Q96SZ6 601 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 HEMGNQ9BXL5 484 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 CARD9Q9H257 536 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 MRPS23Q9Y3D9 190 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 MRFAP1Q9Y605 127 aa16.24■□□□□ 0.19
SFSWAP-206ENST00000537582 STC2O76061 302 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 ZRANB2O95218 330 aaKnown RBP eCLIP16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 KLKB1P03952 638 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 PRLRP16471 622 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 DPYSL3Q14195 570 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 ARTNQ5T4W7 220 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 SPOCD1Q6ZMY3 1216 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 TADA2BQ86TJ2 420 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 ST13P5Q8NFI4 369 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 NCAPGQ9BPX3 1015 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 CALN1Q9BXU9 219 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 SIK2Q9H0K1 926 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 S1PR5Q9H228 398 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 DDX56Q9NY93 547 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 CCL26Q9Y258 94 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 C5orf42Q9H799 3197 aa16.23■□□□□ 0.19
SFSWAP-206ENST00000537582 TRAV19A0A0A6YYK7 116 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 GOLGA6L7A0A1B0GV03 622 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 PRAMEF12O95522 483 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 IL4RP24394 825 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 CDKN2BP42772 138 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 SCAPQ12770 1279 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 NNTQ13423 1086 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 KRT81Q14533 505 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 PPP2R5DQ14738 602 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 DPYSL2Q16555 572 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 EFHC2Q5JST6 749 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 BRMS1LQ5PSV4 323 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 PIK3R6Q5UE93 754 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 KAZNQ674X7 775 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 C14orf80Q86SX3 495 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 RCOR2Q8IZ40 523 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 ZDHHC14Q8IZN3 488 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 LEMD2Q8NC56 503 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 LRRN4CLQ8ND94 238 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 MYEOVQ96EZ4 313 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 PBKQ96KB5 322 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 GAS2L1Q99501 681 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 CDX2Q99626 313 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 SLITRK6Q9H5Y7 841 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 TASP1Q9H6P5 420 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 CDC23Q9UJX2 597 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 HBS1LQ9Y450 684 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 HS3ST4Q9Y661 456 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 DENND4CQ5VZ89 1909 aa16.22■□□□□ 0.19
SFSWAP-206ENST00000537582 GREM1O60565 184 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 FGF19O95750 216 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 SRGAP2BP0DMP2 458 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 GOT1P17174 413 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 CORO1AP31146 461 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 COL19A1Q14993 1142 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 NADSYN1Q6IA69 706 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 GET4Q7L5D6 327 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 DENND1CQ8IV53 801 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 CMTM8Q8IZV2 173 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 RASGEF1CQ8N431 466 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 TSC1Q92574 1164 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 RBM41Q96IZ5 413 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 CWC15Q9P013 229 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 NR2E1Q9Y466 385 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 MFHAS1Q9Y4C4 1052 aa16.21■□□□□ 0.19
SFSWAP-206ENST00000537582 hCG_1818297A0A087WSY0 165 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 CREB3O43889 395 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 APOEP02649 317 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 FGGP02679 453 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 FSHRP23945 695 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 IRAK1P51617 712 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC7A9P82251 487 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 RING1Q06587 406 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 SEMA3BQ13214 749 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 TAZQ16635 292 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms