RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PFDN6O15212 129 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TYROBPO43914 113 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 HOXB6P17509 224 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 DMC1Q14565 340 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 IRAK1BP1Q5VVH5 260 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PRUNE1Q86TP1 453 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 VPS39Q96JC1 886 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 LXNQ9BS40 222 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ARFGEF2Q9Y6D5 1785 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TCF7P36402 384 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 POLD3Q15054 466 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 RBBP7Q16576 425 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SUSD4Q5VX71 490 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 AMIGO2Q86SJ2 522 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 LEMD2Q8NC56 503 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 STARD8Q92502 1023 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SLC35C1Q96A29 364 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 DNAJC18Q9H819 358 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 EML4Q9HC35 981 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 FBXO6Q9NRD1 293 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 LRRC4BQ9NT99 713 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 COPG2Q9UBF2 871 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SCAF8Q9UPN6 1271 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PCDHB2Q9Y5E7 798 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ITM2AO43736 263 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PROZP22891 400 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 FAM102AQ5T9C2 384 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PPP4R4Q6NUP7 873 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ACMSDQ8TDX5 336 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 KRT35Q92764 455 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CDRT15Q96T59 188 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 YME1L1Q96TA2 773 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 C6orf62Q9GZU0 229 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 THAP1Q9NVV9 213 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 IPPQ9Y573 584 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 A0A1B0GVG6 124 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 C2orf71A6NGG8 1288 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TMEM114B3SHH9 223 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 H6PDO95479 791 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 BNC1Q01954 994 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TAP1Q03518 808 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 LAMC2Q13753 1193 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 USP10Q14694 798 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SLC26A11Q86WA9 606 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SNX32Q86XE0 403 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SLC9A9Q8IVB4 645 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 GPD1LQ8N335 351 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 KYQ8NBH2 561 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SKA2Q8WVK7 121 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PI4K2AQ9BTU6 479 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 EBF3Q9H4W6 596 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CLK4Q9HAZ1 481 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PCDH9Q9HC56 1237 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 RNF181Q9P0P0 153 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SOBPA7XYQ1 873 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 VWA5AO00534 786 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 GLRA3O75311 464 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 MTRF1O75570 445 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 RALBP11234 206 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PAX3P23760 479 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SDC4P31431 198 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 AVPR1AP37288 418 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 MAGEA10P43363 369 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ADGRD1Q6QNK2 874 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 THNSL1Q8IYQ7 743 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 GOLM1Q8NBJ4 401 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SPOCK2Q92563 424 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 MASTLQ96GX5 879 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 RUSC1Q9BVN2 902 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 EFCAB1Q9HAE3 211 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 BLOC1S4Q9NUP1 217 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 STK39Q9UEW8 545 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CAMTA1Q9Y6Y1 1673 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ALDH2P05091 517 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SSTR1P30872 391 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 FAAP100Q0VG06 881 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 APOFQ13790 326 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TAF5Q15542 800 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 NADK2Q4G0N4 442 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 OR9Q1Q8NGQ5 310 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 LRRC39Q96DD0 335 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ELMO2Q96JJ3 720 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 SH2D3AQ9BRG2 576 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TSR3Q9UJK0 312 aaKnown RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CLOCKO15516 846 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FARP2O94887 1054 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 KCNA2P16389 499 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 KCNQ4P56696 695 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 BFSP2Q13515 415 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 NKX1-1Q15270 411 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CYP4A22Q5TCH4 519 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 GPR107Q5VW38 600 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 IL31Q6EBC2 164 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CGB2Q6NT52 195 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TDRD5Q8NAT2 981 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms