RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FAM187BQ17R55 369 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 ZNF484Q5JVG2 852 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 ATG16L1Q676U5 607 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 LAIR1Q6GTX8 287 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 WDR93Q6P2C0 686 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 ANKRD16Q6P6B7 361 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 KIRREL2Q6UWL6 708 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-208ENST00000536710 VRK3Q8IV63 474 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 ANKRD44Q8N8A2 993 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 OR52L2PQ8NGH6 319 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 REEP2Q9BRK0 252 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 GPR63Q9BZJ6 419 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 KCNK9Q9NPC2 374 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 RXFP3Q9NSD7 469 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 PI4KBQ9UBF8 816 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 ARHGAP26Q9UNA1 814 aa6.05□□□□□ -1.44
PRKDC-208ENST00000536710 MBD3L5A6NJ08 208 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 PRAMEF2O60811 474 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 SLC3A2P08195 630 aaKnown RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 CNPP09543 421 aaKnown RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 MYCLP12524 364 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 ATP1A3P13637 1013 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 CCT8P50990 548 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 JAK3P52333 1124 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 TAS2R50P59544 299 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 VAMP2P63027 116 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 FAAH2Q6GMR7 532 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 MTHFD1LQ6UB35 978 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 PRRT2Q7Z6L0 340 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 TCP11L2Q8N4U5 519 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 C12orf76Q8N812 135 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 LINS1Q8NG48 757 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 KTI12Q96EK9 354 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-208ENST00000536710 HS6ST2Q96MM7 605 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 FSD1LQ9BXM9 530 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 UNC45AQ9H3U1 944 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 IRAK4Q9NWZ3 460 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 TMEM160Q9NX00 188 aa6.04□□□□□ -1.44
PRKDC-208ENST00000536710 CCDC196A0A1B0GTZ2 297 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-208ENST00000536710 VWA3AA6NCI4 1184 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 KLK10O43240 276 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 HNRNPRO43390 633 aaKnown RBP6.03□□□□□ -1.44
PRKDC-208ENST00000536710 TSPAN3O60637 253 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 EXOC3O60645 756 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 TJP3O95049 919 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 ESRRBO95718 433 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 C1RP00736 705 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 MATN1P21941 496 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 GPC5P78333 572 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 MPP1Q00013 466 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 FAM153CQ494X1 144 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 NAPRTQ6XQN6 538 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 Q6YL49 198 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 RASGRP2Q7LDG7 609 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 SFTPA1Q8IWL2 248 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 USP38Q8NB14 1042 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 CLEC4CQ8WTT0 213 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 GLMPQ8WWB7 406 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 ARRDC3Q96B67 414 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 RRP36Q96EU6 259 aaKnown RBP6.03□□□□□ -1.44
PRKDC-208ENST00000536710 COQ10AQ96MF6 247 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 MMS19Q96T76 1030 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 ELOVL1Q9BW60 279 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 CIPCQ9C0C6 399 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 CDCP1Q9H5V8 836 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 PDE11AQ9HCR9 933 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 TFCP2L1Q9NZI6 479 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 RCE1Q9Y256 329 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 TMEM98Q9Y2Y6 226 aa6.03□□□□□ -1.44
PRKDC-208ENST00000536710 PEX12O00623 359 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 ZNF213O14771 459 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 ANP32CO43423 234 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 CD4P01730 458 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 ALDOAP04075 364 aaKnown RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 HNRNPA1P09651 372 aaKnown RBP eCLIP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 TGM1P22735 817 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 ITPKBP27987 946 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 MPLP40238 635 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 TLE3Q04726 772 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 SIM2Q14190 667 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 DCTN1Q14203 1278 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 RNASE12Q5GAN4 147 aaKnown RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 AARS2Q5JTZ9 985 aaKnown RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 BBS12Q6ZW61 710 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 PTGR2Q8N8N7 351 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 PCYOX1LQ8NBM8 494 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 SLC2A12Q8TD20 617 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 LINC00476Q8WZB0 136 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 TRMT61AQ96FX7 289 aaKnown RBP6.02□□□□□ -1.45
PRKDC-208ENST00000536710 ADGRE3Q9BY15 652 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 CLPBQ9H078 707 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 SYBUQ9NX95 663 aa6.02□□□□□ -1.45
PRKDC-208ENST00000536710 SALL3Q9BXA9 1300 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 SAC3D1A6NKF1 404 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 NPIPB8E9PQR5 432 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 FYB1O15117 783 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms