RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TDRPQ86YL5 185 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SCN4BQ8IWT1 228 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DCP1BQ8IZD4 617 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ALLCQ8N6M5 410 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SCAMP5Q8TAC9 235 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CKAP2Q8WWK9 683 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.267e-8■■□□□ 13.1
CDK5RAP3-202ENST00000536708 NKD2Q969F2 451 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CLSTN3Q9BQT9 956 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ADAM33Q9BZ11 813 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ULBP1Q9BZM6 244 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 HAUS2Q9NVX0 235 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PCDHB12Q9Y5F1 795 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SIGLEC16A6NMB1 481 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CA3P07451 260 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CA8P35219 290 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PPM1AP35813 382 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GJC1P36383 396 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GRIK1P39086 918 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PBX2P40425 430 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MAGEA4P43358 317 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DSG1Q02413 1049 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 OASLQ15646 514 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CCDC38Q502W7 563 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CYB5D1Q6P9G0 228 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 POLNQ7Z5Q5 900 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PHOSPHO2Q8TCD6 241 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CFAP57Q96MR6 1250 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TTC25Q96NG3 672 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SEPT5Q99719 369 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 FRMD8P1Q9BZ68 369 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MTIF3Q9H2K0 278 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DNPEPQ9ULA0 475 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PCDHB5Q9Y5E4 795 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
CDK5RAP3-202ENST00000536708 hCG_1818297A0A087WSY0 165 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 H7C4K7 107 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 URODP06132 367 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ITGAVP06756 1048 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 VIMP08670 466 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 USP17L7P0C7H9 530 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DNAJB1P25685 340 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC5A3P53794 718 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 NR1H3Q13133 447 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GPR17Q13304 367 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MORF4L2Q15014 288 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RASA2Q15283 850 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CDO1Q16878 200 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 C15orf59Q2T9L4 293 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ATP13A4Q4VNC1 1196 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RAB41Q5JT25 222 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 BHLHA9Q7RTU4 235 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MAGEC3Q8TD91 643 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 FNIP1Q8TF40 1166 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MAML1Q92585 1016 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ACSF2Q96CM8 615 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SGSM3Q96HU1 749 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 HSFY1Q96LI6 401 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ELAC2Q9BQ52 826 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PHACTR1Q9C0D0 580 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ZBP1Q9H171 429 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KLHL11Q9NVR0 708 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DONSONQ9NYP3 566 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 WDR35Q9P2L0 1181 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 YJEFN3A6XGL0 299 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 E7ENQ6 273 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KRT1P04264 644 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 BRAFP15056 766 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CREB1P16220 341 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PSMA2P25787 234 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ELF1P32519 619 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SSR1P43307 286 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 VPS41P49754 854 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PGFP49763 221 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 VCPP55072 806 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DUSP4Q13115 394 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 NFE2Q16621 373 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 P3H1Q32P28 736 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TFDP3Q5H9I0 405 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TXNRD3NBQ6F5E7 133 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC26A9Q7LBE3 791 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GSTA5Q7RTV2 222 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CYP4X1Q8N118 509 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PWWP2AQ96N64 755 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RBM15Q96T37 977 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■□□ 17.1
CDK5RAP3-202ENST00000536708 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TPX2Q9ULW0 747 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC12A4Q9UP95 1085 aa13.41□□□□□ -0.26
CDK5RAP3-202ENST00000536708 YBX2Q9Y2T7 364 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms