RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 OR56A3Q8NH54 315 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 ATRIPQ8WXE1 791 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 LRTOMTQ8WZ04 291 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 TIFAQ96CG3 184 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 PLEKHF1Q96S99 279 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 ARPP21Q9UBL0 812 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-207ENST00000536634 TPCN1Q9ULQ1 816 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 PCDHAC2Q9Y5I4 1007 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 ECM29Q5VYK3 1845 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 SLC16A3O15427 465 aaKnown RBP6.43□□□□□ -1.38
CLIP1-207ENST00000536634 TTLL1O95922 423 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 HRGP04196 525 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 IL6RP08887 468 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-207ENST00000536634 BRAFP15056 766 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 LRPAP1P30533 357 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 ELLP55199 621 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-207ENST00000536634 KRT17Q04695 432 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 RAB32Q13637 225 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 E2F2Q14209 437 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 KIAA0753Q2KHM9 967 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 PLA1AQ53H76 456 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 ZNF618Q5T7W0 954 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 DPY19L2P1Q6NXN4 242 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 ZNF551Q7Z340 670 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-207ENST00000536634 SRGAP1Q7Z6B7 1085 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 APOBEC3FQ8IUX4 373 aaKnown RBP6.43□□□□□ -1.38
CLIP1-207ENST00000536634 SARAFQ96BY9 339 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 ZBED3Q96IU2 234 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-207ENST00000536634 HAPLN3Q96S86 360 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 ZNF518BQ9C0D4 1074 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 ARHGAP39Q9C0H5 1083 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 SACM1LQ9NTJ5 587 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 SERTAD4Q9NUC0 356 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 PTGFRNQ9P2B2 879 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 CHPF2Q9P2E5 772 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 AOX1Q06278 1338 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 XIRP2A4UGR9 3374 aa6.43□□□□□ -1.38
CLIP1-207ENST00000536634 COL1A1P02452 1464 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-207ENST00000536634 TRIM43BA6NCK2 446 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 NXPH3O95157 252 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 PARNO95453 639 aaKnown RBP6.42□□□□□ -1.38
CLIP1-207ENST00000536634 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLIP1-207ENST00000536634 WT1P19544 449 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-207ENST00000536634 DRD4P21917 467 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 KLRK1P26718 216 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 ADORA2AP29274 412 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 DGKEP52429 567 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 CACNB3P54284 484 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 CNGA2Q16280 664 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 C3orf38Q5JPI3 329 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 TEDDM1Q5T9Z0 273 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 DEPDC1Q5TB30 811 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 ZDHHC24Q6UX98 284 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 UBE2Q1Q7Z7E8 422 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 SLC15A3Q8IY34 581 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 ZNF384Q8TF68 577 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 GLG1Q92896 1179 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 TRIM43Q96BQ3 446 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-207ENST00000536634 SUCLG2Q96I99 432 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 DEFB129Q9H1M3 183 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 ARHGEF3Q9NR81 526 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 ALPK3Q96L96 1907 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 MED23Q9ULK4 1368 aa6.42□□□□□ -1.38
CLIP1-207ENST00000536634 ISM1B1AKI9 464 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 GCOM1H8Y6P7 765 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-207ENST00000536634 GOLIM4O00461 696 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 MARCH6O60337 910 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 TLR5O60602 858 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 FESP07332 822 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 MYF5P13349 255 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 RHCEP18577 417 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 CCT8P50990 548 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 ATXN1P54253 815 aaKnown RBP6.41□□□□□ -1.38
CLIP1-207ENST00000536634 PROK1P58294 105 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 FMO1Q01740 532 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 RHDQ02161 417 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 MGAT5BQ3V5L5 792 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 PLAC9Q5JTB6 97 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 DARS2Q6PI48 645 aaKnown RBP6.41□□□□□ -1.38
CLIP1-207ENST00000536634 SESTD1Q86VW0 696 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 BPIFB1Q8TDL5 484 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 BRI3BPQ8WY22 251 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 R3HDM4Q96D70 268 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 PCDHGB6Q9Y5F9 930 aa6.41□□□□□ -1.38
CLIP1-207ENST00000536634 CLRN2A0PK11 232 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 A1L4Q6 167 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 H0YIZ8 118 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 VNN1O95497 513 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 GPD1P21695 349 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 PEX2P28328 305 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 CTGFP29279 349 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 PDE6CP51160 858 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 FAM193AP78312 1265 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 SATB1Q01826 763 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 POLD3Q15054 466 aaPredicted RBP6.4□□□□□ -1.38
CLIP1-207ENST00000536634 LY6KQ17RY6 165 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 PTCHD3Q3KNS1 767 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 PPP4R4Q6NUP7 873 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 Q7L0L9 218 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 TMEM171Q8WVE6 324 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms