RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
MRPS35-202ENST00000536569 ZNF419Q96HQ0 510 aaPredicted RBP13.75□□□□□ -0.21
MRPS35-202ENST00000536569 TRIM62Q9BVG3 475 aa13.75□□□□□ -0.21
MRPS35-202ENST00000536569 SRRTQ9BXP5 876 aaKnown RBP13.75□□□□□ -0.21
MRPS35-202ENST00000536569 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
MRPS35-202ENST00000536569 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
MRPS35-202ENST00000536569 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
MRPS35-202ENST00000536569 UPK3BL1B0FP48 263 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 PATE3B3GLJ2 98 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 UPK3BL2E5RIL1 263 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 RNF225M0QZC1 329 aaPredicted RBP13.74□□□□□ -0.21
MRPS35-202ENST00000536569 MED7O43513 233 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 LTFP02788 710 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 SERPINF2P08697 491 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 C7P10643 843 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 CEACAM1P13688 526 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 LCP1P13796 627 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 ITPKAP23677 461 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
MRPS35-202ENST00000536569 OXTRP30559 389 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 IL12RB1P42701 662 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 ACADSBP45954 432 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 SLC11A2P49281 568 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 UBE2HP62256 183 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 FUT11Q495W5 492 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 SYCP2LQ5T4T6 812 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 N4BP2L1Q5TBK1 243 aaPredicted RBP13.74□□□□□ -0.21
MRPS35-202ENST00000536569 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
MRPS35-202ENST00000536569 EDEM1Q92611 657 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 ZSWIM1Q9BR11 485 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 TMEM74BQ9NUR3 256 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 KIAA1468Q9P260 1216 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 USP36Q9P275 1121 aaKnown RBP13.74□□□□□ -0.21
MRPS35-202ENST00000536569 SUSD2Q9UGT4 822 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 SFMBT1Q9UHJ3 866 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 RWDD2AQ9UIY3 292 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 ANGPTL2Q9UKU9 493 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 RAD54BQ9Y620 910 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 LAMA1P25391 3075 aa13.74□□□□□ -0.21
MRPS35-202ENST00000536569 CNOT1A5YKK6 2376 aaKnown RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 WASH3PC4AMC7 463 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 BIN1O00499 593 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 NDUFS2O75306 463 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 GABBR2O75899 941 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 IGLV3-19P01714 112 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 NCAM1P13591 858 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 ENGP17813 658 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 BRD2P25440 801 aaKnown RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 CD6P30203 668 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 GPD2P43304 727 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 ARID5AQ03989 594 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 GFPT1Q06210 699 aaPredicted RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 ZNF234Q14588 700 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 WDR45BQ5MNZ6 344 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 ARMCX6Q7L4S7 300 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 KIAA0907Q7Z7F0 614 aaPredicted RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 CADM4Q8NFZ8 388 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 KAT5Q92993 513 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 CNTNAP3Q9BZ76 1288 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
MRPS35-202ENST00000536569 FBRSQ9HAH7 460 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 PRDM16Q9HAZ2 1276 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 CAPN10Q9HC96 672 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 CYP8B1Q9UNU6 501 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 PLA2G4CQ9UP65 541 aa13.73□□□□□ -0.21
MRPS35-202ENST00000536569 SYPP08247 313 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 GNSP15586 552 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 HLA-FP30511 346 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 RGS7P49802 495 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 NOVA1P51513 510 aaKnown RBP13.72□□□□□ -0.21
MRPS35-202ENST00000536569 STX17P56962 302 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 PSAPL1Q6NUJ1 521 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 KIAA1324Q6UXG2 1013 aaKnown RBP13.72□□□□□ -0.21
MRPS35-202ENST00000536569 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 SLC41A1Q8IVJ1 513 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 AHI1Q8N157 1196 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 PRCCQ92733 491 aaPredicted RBP13.72□□□□□ -0.21
MRPS35-202ENST00000536569 SIPA1Q96FS4 1042 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 KREMEN1Q96MU8 473 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 SERPINB11Q96P15 392 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 CIPCQ9C0C6 399 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 MKRN2Q9H000 416 aaKnown RBP13.72□□□□□ -0.21
MRPS35-202ENST00000536569 PCED1AQ9H1Q7 454 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 WSB2Q9NYS7 404 aaPredicted RBP13.72□□□□□ -0.21
MRPS35-202ENST00000536569 CLEC4EQ9ULY5 219 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 TLR6Q9Y2C9 796 aa13.72□□□□□ -0.21
MRPS35-202ENST00000536569 TYW5A2RUC4 315 aaKnown RBP13.71□□□□□ -0.21
MRPS35-202ENST00000536569 GTPBP10A4D1E9 387 aaKnown RBP13.71□□□□□ -0.21
MRPS35-202ENST00000536569 MSI1O43347 362 aaKnown RBP13.71□□□□□ -0.21
MRPS35-202ENST00000536569 ACSL4O60488 711 aa13.71□□□□□ -0.21
MRPS35-202ENST00000536569 CFIP05156 583 aa13.71□□□□□ -0.21
MRPS35-202ENST00000536569 ATP5BP06576 529 aaKnown RBP13.71□□□□□ -0.21
MRPS35-202ENST00000536569 KCNA4P22459 653 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms