RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ACSS2Q9NR19 701 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ZDHHC7Q9NXF8 308 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ADGRA3Q8IWK6 1321 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 MINDY4BA8MYZ0 360 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 H3BMQ9 156 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 PPEF1O14829 653 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 DDNO94850 711 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 MFN2O95140 757 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 BMP15O95972 392 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 GNRH1P01148 92 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 GNAO1P09471 354 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 DLDP09622 509 aaKnown RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 H2AFZP0C0S5 128 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 VDRP11473 427 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 MUTP22033 750 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 TECP42680 631 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 PDIA2Q13087 525 aaKnown RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 PMS2P3Q13401 168 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 RASGRF1Q13972 1273 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 TFDP1Q14186 410 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 WTAPQ15007 396 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZMYND11Q15326 602 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 NEDD8Q15843 81 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ADRM1Q16186 407 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZNF829Q3KNS6 432 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZNF568Q3ZCX4 644 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 MSS51Q4VC12 460 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 DCAF17Q5H9S7 520 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.84□□□□□ -1.8
MCF2-210ENST00000536274 ATAD3BQ5T9A4 648 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 BROXQ5VW32 411 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 BTBD8Q5XKL5 378 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ANKRD26P1Q6NSI1 321 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ATG14Q6ZNE5 492 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 LRRC55Q6ZSA7 311 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 UNC13DQ70J99 1090 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 H2AFVQ71UI9 128 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 SPATC1Q76KD6 591 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 COPS6Q7L5N1 327 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 FBXO33Q7Z6M2 555 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 GALNT13Q8IUC8 556 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZNF654Q8IZM8 581 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 DEFB107AQ8IZN7 70 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 LRRC47Q8N1G4 583 aaKnown RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 ANKRD35Q8N283 1001 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 MARVELD2Q8N4S9 558 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZNF276Q8N554 614 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 LINC00469Q8N7U9 141 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 VGLL2Q8N8G2 317 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 XAGE3Q8WTP9 111 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ST8SIA2Q92186 375 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 SLC5A5Q92911 643 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 USP13Q92995 863 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZNF486Q96H40 463 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 COG8Q96MW5 612 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ALPK1Q96QP1 1244 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 EYA3Q99504 573 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 SENP7Q9BQF6 1050 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 TMEM109Q9BVC6 243 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZNF717Q9BY31 904 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 ROPN1BQ9BZX4 212 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 RPF2Q9H7B2 306 aaKnown RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 NRDE2Q9H7Z3 1164 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 C10orf88Q9H8K7 445 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ROPN1Q9HAT0 212 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 FKBP14Q9NWM8 211 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 SNTG2Q9NY99 539 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 MAT2BQ9NZL9 334 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 C6orf203Q9P0P8 240 aaPredicted RBP3.84□□□□□ -1.8
MCF2-210ENST00000536274 CPNE7Q9UBL6 633 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ERGIC3Q9Y282 383 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 PCDHB2Q9Y5E7 798 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 CPQQ9Y646 472 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 ALG6Q9Y672 507 aa3.84□□□□□ -1.8
MCF2-210ENST00000536274 OTOFQ9HC10 1997 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 UTYO14607 1347 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GOLGA8QA0A0J9YX86 632 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MYMKA6NI61 221 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ATP6V1G2-DDX39BF2Z307 99 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ERVH48-1M5A8F1 160 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MAGEB2O15479 319 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 KATNA1O75449 491 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 JRKO75564 520 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ALDH1A2O94788 518 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PCCAP05165 728 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 INHBBP09529 407 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PIM1P11309 404 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 ATF4P18848 351 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 ALAS2P22557 587 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CPOXP36551 454 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 HPCAL1P37235 193 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 OPRL1P41146 370 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 MCAMP43121 646 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GCGRP47871 477 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TM4SF4P48230 202 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 AQP5P55064 265 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PKNOX1P55347 436 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ELOAQ14241 798 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 SF3B3Q15393 1217 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms