RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 WASHC5Q12768 1159 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 STX3Q13277 289 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 TBCCQ15814 346 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 ACSBG2Q5FVE4 666 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CES4AQ5XG92 561 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 NOTUMQ6P988 496 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CATSPER4Q7RTX7 472 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CDKL2Q92772 493 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 SIKE1Q9BRV8 207 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 NAT9Q9BTE0 207 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 KATNBL1Q9H079 304 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 SUFUQ9UMX1 484 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 B2RBV5 119 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 PIRO00625 290 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 MAGEC1O60732 1142 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CD4P01730 458 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 HOXD8P13378 290 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CCDC130P13994 396 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 GOT1P17174 413 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 ADORA2BP29275 332 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 RAP1GDS1P52306 607 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 AQP5P55064 265 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 TSNAXIP1Q2TAA8 658 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 SLC25A52Q3SY17 297 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 MARK2Q7KZI7 788 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 CDCA5Q96FF9 252 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 FERMT1Q9BQL6 677 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 EIF2AQ9BY44 585 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 EIF2B3Q9NR50 452 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 GDAP2Q9NXN4 497 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 PPARGC1AQ9UBK2 798 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 SORCS3Q9UPU3 1222 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 MYO18AQ92614 2054 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 WDR27A2RRH5 827 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 RRN3P2A6NIE6 340 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 KPNA7A9QM74 516 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 STRNO43815 780 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 STK10O94804 968 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 LMO2P25791 158 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 PGM1P36871 562 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 CCDC6Q16204 474 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 DENND5BQ6ZUT9 1274 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 COLGALT1Q8NBJ5 622 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 DNAJC9Q8WXX5 260 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 ATP2A3Q93084 1043 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 C20orf27Q9GZN8 174 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 FZD10Q9ULW2 581 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 GINS2Q9Y248 185 aa16.52■□□□□ 0.24
CHMP1A-202ENST00000535997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 OPHN1O60890 802 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 ACADSP16219 412 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 VHLP40337 213 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 SNAPC2Q13487 334 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 NAB1Q13506 487 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 CASC4Q6P4E1 433 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 CCDC33Q8N5R6 958 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 LGMNQ99538 433 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 SNX25Q9H3E2 840 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF395Q9H8N7 513 aaPredicted RBP16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 DCDC2Q9UHG0 476 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 HBS1LQ9Y450 684 aaKnown RBP16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 HES2Q9Y543 173 aa16.52■□□□□ 0.23
CHMP1A-202ENST00000535997 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 GPR32O75388 356 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 GSRP00390 522 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 SERPINA6P08185 405 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 VAV1P15498 845 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 PNPLA4P41247 253 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 GLUD2P49448 558 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 SLC34A1Q06495 639 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 NIPAL4Q0D2K0 466 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 DGKDQ16760 1214 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 GLRA4Q5JXX5 417 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 TREML1Q86YW5 311 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 PYROXD2Q8N2H3 581 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 STMN2Q93045 179 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 STX18Q9P2W9 335 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 TAGLN3Q9UI15 199 aa16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 CORO1CQ9ULV4 474 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-202ENST00000535997 CCDC195A0A1B0GUA6 201 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 F8W8V4 182 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 HCRTO43612 131 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 SMNDC1O75940 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 PSMG1O95456 288 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 KITP10721 976 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 PGAM1P18669 254 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms