RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ADAT2Q7Z6V5 191 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GLRX5Q86SX6 157 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 OR2T3Q8NH03 318 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 WFIKKN2Q8TEU8 576 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PIWIL1Q96J94 861 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ARID3AQ99856 593 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 LRRC4Q9HBW1 653 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZBED1O96006 694 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 DNTTP04053 509 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HLA-EP13747 358 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PFKFB1P16118 471 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TKTL1P51854 596 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 COPAP53621 1224 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PPP3CAQ08209 521 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ENPP2Q13822 863 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PIGZQ86VD9 579 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SIX6OS1Q8N1H7 587 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GALNT15Q8N3T1 639 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 MDM1Q8TC05 714 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SORCS1Q8WY21 1168 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 BTBD1Q9H0C5 482 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FBRSQ9HAH7 460 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 IL21RQ9HBE5 538 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CISHQ9NSE2 258 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FNDC3AQ9Y2H6 1198 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PCDHGB2Q9Y5G2 931 aa13.56□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ANKRD11Q6UB99 2663 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 A0A1B0GVL5 298 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TAF4O00268 1085 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TSPAN3O60637 253 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CBFA2T3O75081 653 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 IGLV3-19P01714 112 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 EPB41P11171 864 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GTF2H1P32780 548 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CSNK1EP49674 416 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CCT8P50990 548 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 BCAT1P54687 386 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 DNM1Q05193 864 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ENPEPQ07075 957 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ADAM9Q13443 819 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 COL28A1Q2UY09 1125 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CCDC157Q569K6 752 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CHST9Q7L1S5 443 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SLCO6A1Q86UG4 719 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PDZD3Q86UT5 571 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FMNL3Q8IVF7 1028 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 AHI1Q8N157 1196 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FBXL13Q8NEE6 735 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CCDC34Q96HJ3 373 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FAXDC2Q96IV6 333 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 UBXN6Q9BZV1 441 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 KIAA1522Q9P206 1035 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 MAPK8IP1Q9UQF2 711 aa13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HBS1LQ9Y450 684 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TYW5A2RUC4 315 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FSBPO95073 299 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SEMA4FO95754 770 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GRK6P43250 576 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SYKP43405 635 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GRIA4P48058 902 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 C21orf59P57076 290 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZBTB16Q05516 673 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SFSWAPQ12872 951 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 NFIL3Q16649 462 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SGO2Q562F6 1265 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TCERG1LQ5VWI1 586 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ARHGAP17Q68EM7 881 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CCDC117Q8IWD4 279 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZNF557Q8N988 423 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ANKRD52Q8NB46 1076 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SLC4A11Q8NBS3 891 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GANCQ8TET4 914 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CYB5D2Q8WUJ1 264 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 C6orf106Q9H6K1 298 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 NCKAP1Q9Y2A7 1128 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RAXQ9Y2V3 346 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
TNFRSF1A-207ENST00000535958 XPO1O14980 1071 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RHOBTB3O94955 611 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 LATS1O95835 1130 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CD19P15391 556 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms