RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
KNTC1-208ENST00000535410 SHC3Q92529 594 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 ZSWIM1Q9BR11 485 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 TUBGCP2Q9BSJ2 902 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 POPDC2Q9HBU9 364 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 ELOVL2Q9NXB9 296 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 THAP10Q9P2Z0 257 aaPredicted RBP12.37□□□□□ -0.43
KNTC1-208ENST00000535410 INVSQ9Y283 1065 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 TLR6Q9Y2C9 796 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 STON1Q9Y6Q2 735 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 CACNA1AO00555 2505 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 SDK1Q7Z5N4 2213 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 PIK3R2O00459 728 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 PES1O00541 588 aaKnown RBP12.36□□□□□ -0.43
KNTC1-208ENST00000535410 ACSL4O60488 711 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 APOEP02649 317 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 ATP5BP06576 529 aaKnown RBP12.36□□□□□ -0.43
KNTC1-208ENST00000535410 GLI1P08151 1106 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 CHRM1P11229 460 aaPredicted RBP12.36□□□□□ -0.43
KNTC1-208ENST00000535410 GABRG2P18507 467 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 WASP42768 502 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 DPCR1Q3MIW9 517 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 TOGARAM2Q6ZUX3 1019 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
KNTC1-208ENST00000535410 IRF2BP1Q8IU81 584 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 CEP76Q8TAP6 659 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 PIWIL1Q96J94 861 aaKnown RBP12.36□□□□□ -0.43
KNTC1-208ENST00000535410 CIPCQ9C0C6 399 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 LHX5Q9H2C1 402 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
KNTC1-208ENST00000535410 A0A1W2PQF6 199 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 KCNJ18B7U540 433 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 MSI1O43347 362 aaKnown RBP12.35□□□□□ -0.43
KNTC1-208ENST00000535410 NDUFS2O75306 463 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 GABBR2O75899 941 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 IGLV3-27P01718 113 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 CDK17Q00537 523 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 RPL6Q02878 288 aaKnown RBP12.35□□□□□ -0.43
KNTC1-208ENST00000535410 LMAN2Q12907 356 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 KCNJ12Q14500 433 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 SF3A2Q15428 464 aaKnown RBP12.35□□□□□ -0.43
KNTC1-208ENST00000535410 MAP7D1Q3KQU3 841 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 SYCP2LQ5T4T6 812 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 DENND1BQ6P3S1 775 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 SERPINA13PQ6UXR4 307 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 AHI1Q8N157 1196 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
KNTC1-208ENST00000535410 RLN3Q8WXF3 142 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 PIGKQ92643 395 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 FOXJ1Q92949 421 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 SYNCQ9H7C4 482 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.35□□□□□ -0.43
KNTC1-208ENST00000535410 ASNSD1Q9NWL6 643 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 CACNA2D2Q9NY47 1150 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 DNAJC12Q9UKB3 198 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
KNTC1-208ENST00000535410 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 MYO16Q9Y6X6 1858 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 TSPAN3O60637 253 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 MOCS3O95396 460 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ACADMP11310 421 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ABCB4P21439 1286 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 OXTRP30559 389 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 OXCT1P55809 520 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ENPP2Q13822 863 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 GEN1Q17RS7 908 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 DAB2IPQ5VWQ8 1189 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 RNF43Q68DV7 783 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ZDHHC17Q8IUH5 632 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ATP6V0D2Q8N8Y2 350 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 HJURPQ8NCD3 748 aaPredicted RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 TMEM35BQ8NCS4 154 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 MSANTD4Q8NCY6 345 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 DQX1Q8TE96 717 aaKnown RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 PPP1R13BQ96KQ4 1090 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 BTN2A3PQ96KV6 586 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 ACOX2Q99424 681 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 NUSAP1Q9BXS6 441 aaKnown RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 PRDM16Q9HAZ2 1276 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 CALCOCO1Q9P1Z2 691 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 TJP2Q9UDY2 1190 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 SUN2Q9UH99 717 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms