RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 KYAT3Q6YP21 454 aaKnown RBP5.86□□□□□ -1.47
PRKDC-205ENST00000535375 UBE2Q1Q7Z7E8 422 aa5.86□□□□□ -1.47
PRKDC-205ENST00000535375 GLMPQ8WWB7 406 aa5.86□□□□□ -1.47
PRKDC-205ENST00000535375 COQ8BQ96D53 544 aa5.86□□□□□ -1.47
PRKDC-205ENST00000535375 STK33Q9BYT3 514 aa5.86□□□□□ -1.47
PRKDC-205ENST00000535375 FNIP2Q9P278 1114 aa5.86□□□□□ -1.47
PRKDC-205ENST00000535375 SOCS2O14508 198 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 PRYO14603 147 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 RRHO14718 337 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 TMEM191BP0C7N4 346 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 CTSAP10619 480 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 NDUFS1P28331 727 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 AGTR2P50052 363 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 SLC12A2P55011 1212 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 HDAC1Q13547 482 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-205ENST00000535375 STARD3Q14849 445 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 EARS2Q5JPH6 523 aaKnown RBP5.85□□□□□ -1.47
PRKDC-205ENST00000535375 DEF8Q6ZN54 512 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 CCDC146Q8IYE0 955 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 IPO4Q8TEX9 1081 aaKnown RBP5.85□□□□□ -1.47
PRKDC-205ENST00000535375 WDR60Q8WVS4 1066 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 KAT2BQ92831 832 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 CELF1Q92879 486 aaKnown RBP5.85□□□□□ -1.47
PRKDC-205ENST00000535375 GJA10Q969M2 543 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 FAR2Q96K12 515 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 SCNM1Q9BWG6 230 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 CDCP1Q9H5V8 836 aa5.85□□□□□ -1.47
PRKDC-205ENST00000535375 AGO4Q9HCK5 861 aaKnown RBP5.85□□□□□ -1.47
PRKDC-205ENST00000535375 UBE2J1Q9Y385 318 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-205ENST00000535375 ZMYM2Q9UBW7 1377 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 C16orf96A6NNT2 1141 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 PIP5K1BO14986 540 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 NTSR2O95665 410 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 ENO1P06733 434 aaKnown RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 CYP19A1P11511 503 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 RPS6KB1P23443 525 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 ALDH18A1P54886 795 aaKnown RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 GAB1Q13480 694 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 MSANTD2Q6P1R3 559 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 ZNF793Q6ZN11 406 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 RBM44Q6ZP01 1051 aaKnown RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 TFAP2DQ7Z6R9 452 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 BCAS4Q8TDM0 211 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 TRMT61AQ96FX7 289 aaKnown RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 PRPF18Q99633 342 aaKnown RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 TTLL2Q9BWV7 592 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 IPO11Q9UI26 975 aaKnown RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 MAGED2Q9UNF1 606 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-205ENST00000535375 AFG3L2Q9Y4W6 797 aa5.84□□□□□ -1.47
PRKDC-205ENST00000535375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-205ENST00000535375 C2CD4BA6NLJ0 364 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 TLR2O60603 784 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 TAF5LO75529 589 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 ITGA5P08648 1049 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 ST6GAL1P15907 406 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 IDUAP35475 653 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 STAT6P42226 847 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 NR4A2P43354 598 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 LAMB3Q13751 1172 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 DHRS13Q6UX07 377 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 FAM57BQ71RH2 274 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 SRFBP1Q8NEF9 429 aaKnown RBP5.83□□□□□ -1.48
PRKDC-205ENST00000535375 SLC22A17Q8WUG5 538 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 C18orf8Q96DM3 657 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 P2RY11Q96G91 374 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 TMEM41AQ96HV5 264 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF845Q96IR2 970 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF48Q96MX3 618 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-205ENST00000535375 ELOVL1Q9BW60 279 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 PRDM16Q9HAZ2 1276 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 FSCN3Q9NQT6 498 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 CDC23Q9UJX2 597 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 PCDHB7Q9Y5E2 793 aa5.83□□□□□ -1.48
PRKDC-205ENST00000535375 SLC22A23A1A5C7 686 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 ANXA6P08133 673 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 PRF1P14222 555 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 AKR1A1P14550 325 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 NPPBP16860 134 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 TFEBP19484 476 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 HOXA7P31268 230 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-205ENST00000535375 PPM1AP35813 382 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 CCT4P50991 539 aaKnown RBP5.82□□□□□ -1.48
PRKDC-205ENST00000535375 ANXA2RQ3ZCQ2 193 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 ANKRD40Q6AI12 368 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 RINT1Q6NUQ1 792 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 WDR93Q6P2C0 686 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 GATAD2AQ86YP4 633 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.82□□□□□ -1.48
PRKDC-205ENST00000535375 LAS2Q8IYD9 372 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 NRSN1Q8IZ57 195 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 ASB12Q8WXK4 309 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 TMEM45AQ9NWC5 275 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 LRCH1Q9Y2L9 728 aa5.82□□□□□ -1.48
PRKDC-205ENST00000535375 SPATA31A5Q5VU36 1347 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 EMSYQ7Z589 1322 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 SPATA31A7Q8IWB4 1347 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 M0QZQ0 153 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms