RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 TWNKQ96RR1 684 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 SLC2A11Q9BYW1 496 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 DCLK3Q9C098 648 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 STON1Q9Y6Q2 735 aa12.12□□□□□ -0.47
CTNND1-238ENST00000534647 A0A1B0GTW7 788 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 TIMM44O43615 452 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 SH3BP5O60239 455 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 KIF20AO95235 890 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 FBXO45P0C2W1 286 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 ZNF883P0CG24 379 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 RALAP11233 206 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 VAMP7P51809 220 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 MFAP3P55082 362 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 STARD3Q14849 445 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 EIF4HQ15056 248 aaKnown RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 FUT11Q495W5 492 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 DBX2Q6ZNG2 339 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 INTS8Q75QN2 995 aaKnown RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 GRAMD1CQ8IYS0 662 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 RGL4Q8IZJ4 473 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 CPXM2Q8N436 756 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 CHCHD4Q8N4Q1 142 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 RBBP8NLQ8NC74 664 aaPredicted RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 FAM174AQ8TBP5 190 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 UCMAQ8WVF2 138 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 PIWIL1Q96J94 861 aaKnown RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 PCED1AQ9H1Q7 454 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 APOBEC3GQ9HC16 384 aaKnown RBP12.11□□□□□ -0.47
CTNND1-238ENST00000534647 NAGPAQ9UK23 515 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
CTNND1-238ENST00000534647 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 TAF4O00268 1085 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 MDM4O15151 490 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 CALUO43852 315 aaPredicted RBP12.1□□□□□ -0.47
CTNND1-238ENST00000534647 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 CLSTN1O94985 981 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 GTF2H1P32780 548 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 PIK3CAP42336 1068 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 RING1Q06587 406 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 RAB41Q5JT25 222 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 CCDC183Q5T5S1 534 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 PROSER1Q86XN7 944 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 FAM217AQ8IXS0 508 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 OR2I1PQ8NGU4 316 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 TOE1Q96GM8 510 aaKnown RBP12.1□□□□□ -0.47
CTNND1-238ENST00000534647 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
CTNND1-238ENST00000534647 SLC6A17Q9H1V8 727 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 CD93Q9NPY3 652 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 ELOVL2Q9NXB9 296 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 PLK2Q9NYY3 685 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 PCDHB9Q9Y5E1 797 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 SPEGQ15772 3267 aa12.1□□□□□ -0.47
CTNND1-238ENST00000534647 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 LZTS3O60299 673 aaPredicted RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 NCAM1P13591 858 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 CMA1P23946 247 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 MAOBP27338 520 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 DEKP35659 375 aaKnown RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 IL12RB1P42701 662 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 TPMTP51580 245 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 PPP3CAQ08209 521 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 GRIK2Q13002 908 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 GEN1Q17RS7 908 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 ZSCAN23Q3MJ62 389 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 PM20D1Q6GTS8 502 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 IL27RAQ6UWB1 636 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 KIAA1324Q6UXG2 1013 aaKnown RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 CCNI2Q6ZMN8 369 aaPredicted RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 NAXDQ8IW45 347 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 TAS1R2Q8TE23 839 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 CAMK1GQ96NX5 476 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 NUP58Q9BVL2 599 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 AGO1Q9UL18 857 aaKnown RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 APOBEC2Q9Y235 224 aaKnown RBP12.09□□□□□ -0.47
CTNND1-238ENST00000534647 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
CTNND1-238ENST00000534647 BAHCC1Q9P281 2608 aa12.08□□□□□ -0.47
CTNND1-238ENST00000534647 SYNCRIPO60506 623 aaKnown RBP12.08□□□□□ -0.48
CTNND1-238ENST00000534647 DKK1O94907 266 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms