RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 ANLNQ9NQW6 1124 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 METTL5Q9NRN9 209 aaKnown RBP13.92□□□□□ -0.18
CMTM1-219ENST00000533953 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.92□□□□□ -0.18
CMTM1-219ENST00000533953 ADAM22Q9P0K1 906 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 MARK1Q9P0L2 795 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 STIM2Q9P246 746 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 WDR35Q9P2L0 1181 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 DEC1Q9P2X7 70 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 TMEM59LQ9UK28 342 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 HCN2Q9UL51 889 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 MYO6Q9UM54 1294 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 SNX10Q9Y5X0 201 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 R4GN57 208 aa13.92□□□□□ -0.18
CMTM1-219ENST00000533953 PRRT4C9JH25 899 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 GFRA2O00451 464 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 DDX3XO00571 662 aaKnown RBP eCLIP13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CACNG3O60359 315 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 PENKP01210 267 aaPredicted RBP13.91□□□□□ -0.18
CMTM1-219ENST00000533953 APODP05090 189 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CASP14P31944 242 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 NOS2P35228 1153 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 TIE1P35590 1138 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CHKAP35790 457 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 GRIA2P42262 883 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 MATKP42679 507 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 WASP42768 502 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 NSFP46459 744 aaKnown RBP13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CXCL12P48061 93 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 PXNP49023 591 aaPredicted RBP13.91□□□□□ -0.18
CMTM1-219ENST00000533953 SLC11A2P49281 568 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 SULT1E1P49888 294 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CENPCQ03188 943 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 RING1Q06587 406 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 KLHL30Q0D2K2 578 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 FIGNQ5HY92 759 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 RAP1GAP2Q684P5 730 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 HEATR6Q6AI08 1181 aaKnown RBP13.91□□□□□ -0.18
CMTM1-219ENST00000533953 GRAMD4Q6IC98 578 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 ACAD10Q6JQN1 1059 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 ZDHHC17Q8IUH5 632 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 UNC45BQ8IWX7 931 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CPXM2Q8N436 756 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 SPEM1Q8N4L4 309 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 TMA16Q96EY4 203 aaKnown RBP13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CFAP57Q96MR6 1250 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 NPY6RQ99463 290 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 EDEM3Q9BZQ6 932 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 PIGVQ9NUD9 493 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 STOML2Q9UJZ1 356 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
CMTM1-219ENST00000533953 CACNA1IQ9P0X4 2223 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 I6L893 689 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 TBL1XO60907 577 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 ADCY5O95622 1261 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 CCDC172P0C7W6 258 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 CHRM1P11229 460 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 HOXD9P28356 352 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 DGKGP49619 791 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 NUMBP49757 651 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 NUBP1P53384 320 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 PTPN5P54829 565 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 RPS24P62847 133 aaKnown RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 ATP11AP98196 1134 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 NHLH1Q02575 133 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 GEN1Q17RS7 908 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 C15orf59Q2T9L4 293 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 C10orf76Q5T2E6 689 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 PIK3R6Q5UE93 754 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 NUGGCQ68CJ6 796 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 HGSNATQ68CP4 663 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 MON1BQ7L1V2 547 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 PHF13Q86YI8 300 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 ALLCQ8N6M5 410 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 WFDC5Q8TCV5 224 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 RXFP2Q8WXD0 754 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 PRICKLE1Q96MT3 831 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
CMTM1-219ENST00000533953 ACOX2Q99424 681 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
CMTM1-219ENST00000533953 A0A0A0MRY4 1105 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 A0A1W2PQJ5 194 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 KCNU1A8MYU2 1149 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 K7ESF4 209 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 KLF8O95600 359 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-219ENST00000533953 APOEP02649 317 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 CYBBP04839 570 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 HNRNPLP14866 589 aaKnown RBP eCLIP13.89□□□□□ -0.19
CMTM1-219ENST00000533953 TACR2P21452 398 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 RRM1P23921 792 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 GBP1P32455 592 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 RFC1P35251 1148 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-219ENST00000533953 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
CMTM1-219ENST00000533953 PRKCIP41743 596 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 MAGEA9P43362 315 aa13.89□□□□□ -0.19
CMTM1-219ENST00000533953 KIR2DL1P43626 348 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-219ENST00000533953 IRAK1P51617 712 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms