RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CIPCQ9C0C6 399 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 ELOVL2Q9NXB9 296 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 CLEC4EQ9ULY5 219 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 CYP8B1Q9UNU6 501 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 NCOR2Q9Y618 2525 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 C4orf47A7E2U8 309 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 PATE3B3GLJ2 98 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 SART1O43290 800 aaKnown RBP16.09■□□□□ 0.17
CPSF1-211ENST00000533492 GPD2P43304 727 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 SLC11A2P49281 568 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 TBX4P57082 545 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 IRX4P78413 519 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 ARHGAP44Q17R89 818 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 DAB2IPQ5VWQ8 1189 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 TRIM65Q6PJ69 517 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 ZNF606Q8WXB4 792 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 FAM149B1Q96BN6 582 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 MRGPRX1Q96LB2 322 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 NUSAP1Q9BXS6 441 aaKnown RBP16.09■□□□□ 0.17
CPSF1-211ENST00000533492 STOML2Q9UJZ1 356 aa16.09■□□□□ 0.17
CPSF1-211ENST00000533492 IGHV1OR15-9A0A0B4J2B8 117 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 LNP1A1A4G5 178 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 CAPN9O14815 690 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 TM4SF5O14894 197 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 THAP12O43422 761 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 NDUFS2O75306 463 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 ADRB1P08588 477 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 SLC9A1P19634 815 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 HOXD9P28356 352 aaPredicted RBP16.08■□□□□ 0.16
CPSF1-211ENST00000533492 GNA15P30679 374 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 IL12RB1P42701 662 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 ZNF33AQ06730 810 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 ZNF234Q14588 700 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 EXOC3L4Q17RC7 722 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 DENND1BQ6P3S1 775 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 TRIM62Q9BVG3 475 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 LSM14BQ9BX40 385 aaKnown RBP16.08■□□□□ 0.16
CPSF1-211ENST00000533492 SLC6A17Q9H1V8 727 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 CD248Q9HCU0 757 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 TMEM9BQ9NQ34 198 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 PLA2G4CQ9UP65 541 aa16.08■□□□□ 0.16
CPSF1-211ENST00000533492 CNOT1A5YKK6 2376 aaKnown RBP16.08■□□□□ 0.16
CPSF1-211ENST00000533492 PLXND1Q9Y4D7 1925 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 ACSL4O60488 711 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 ITPKAP23677 461 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 RING1Q06587 406 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 LMAN2Q12907 356 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 MEA1Q16626 185 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 FUT11Q495W5 492 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 SERPINA13PQ6UXR4 307 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 WFIKKN2Q8TEU8 576 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 SORCS1Q8WY21 1168 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 AZIN2Q96A70 460 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 MED15Q96RN5 788 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 DDX50Q9BQ39 737 aaKnown RBP16.07■□□□□ 0.16
CPSF1-211ENST00000533492 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
CPSF1-211ENST00000533492 CLSTN2Q9H4D0 955 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 TMEM74BQ9NUR3 256 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 APEX2Q9UBZ4 518 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
CPSF1-211ENST00000533492 PILRBQ9UKJ0 227 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 NAALADL1Q9UQQ1 740 aa16.07■□□□□ 0.16
CPSF1-211ENST00000533492 PI4KAP42356 2102 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 CEP192Q8TEP8 1941 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
CPSF1-211ENST00000533492 GOLGA6L7A0A1B0GV03 622 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 TYW5A2RUC4 315 aaKnown RBP16.06■□□□□ 0.16
CPSF1-211ENST00000533492 GTPBP10A4D1E9 387 aaKnown RBP16.06■□□□□ 0.16
CPSF1-211ENST00000533492 IRAK2O43187 625 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 TBL1XO60907 577 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 IGLV3-27P01718 113 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 CFIP05156 583 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 EPHX1P07099 455 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 HLA-FP30511 346 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 HOXD12P35452 270 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 RPL34P49207 117 aaKnown RBP16.06■□□□□ 0.16
CPSF1-211ENST00000533492 ENPP2Q13822 863 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 DUOXA1Q1HG43 343 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 PIK3R6Q5UE93 754 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 TMEM215Q68D42 235 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 RFWD3Q6PCD5 774 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 CHST9Q7L1S5 443 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 RGL4Q8IZJ4 473 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 CEP76Q8TAP6 659 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 DQX1Q8TE96 717 aaKnown RBP16.06■□□□□ 0.16
CPSF1-211ENST00000533492 PRCCQ92733 491 aaPredicted RBP16.06■□□□□ 0.16
CPSF1-211ENST00000533492 SIPA1Q96FS4 1042 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 SLC4A5Q9BY07 1137 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 ACP6Q9NPH0 428 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms