RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 BNIPLQ7Z465 357 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 VPS36Q86VN1 386 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 CNGA4Q8IV77 575 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 ETFBKMTQ8IXQ9 262 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 CD101Q93033 1021 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 PGAP3Q96FM1 320 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 CFAP57Q96MR6 1250 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 P2RY13Q9BPV8 354 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SELENOOQ9BVL4 669 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 PIGVQ9NUD9 493 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 COX16Q9P0S2 106 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 DLGAP2Q9P1A6 1054 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 XPO7Q9UIA9 1087 aaKnown RBP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 NENFQ9UMX5 172 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 KCNU1A8MYU2 1149 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 PENKP01210 267 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 APOEP02649 317 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 CHRNB1P11230 501 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 PDGFRAP16234 1089 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 SLC6A4P31645 630 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 CCR1P32246 355 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 PTPN9P43378 593 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 SLC11A2P49281 568 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 CXCR3P49682 368 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 MESP2Q0VG99 397 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 NME3Q13232 169 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 MAPK8IP2Q13387 824 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 ASTE1Q2TB18 679 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 FAM133BQ5BKY9 247 aaKnown RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 PLEKHA7Q6IQ23 1121 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 FSTL4Q6MZW2 842 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 DNAJC24Q6P3W2 148 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 EZH1Q92800 747 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 BHMTQ93088 406 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 CLDN23Q96B33 292 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 BBS2Q9BXC9 721 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 ZNHIT6Q9NWK9 470 aaKnown RBP12.45□□□□□ -0.42
SSBP3-214ENST00000533209 PLK2Q9NYY3 685 aa12.45□□□□□ -0.42
SSBP3-214ENST00000533209 SSU72P8A0A1W2PR75 194 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 CACNG3O60359 315 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 TSPAN3O60637 253 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 TULP3O75386 442 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ENDOD1O94919 500 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ADCY5O95622 1261 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 F9P00740 461 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 SLC2A3P11169 496 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 TYRP14679 529 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 SDC4P31431 198 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 EIF2DP41214 584 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RPS9P46781 194 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ATXN1P54253 815 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RPL7AP62424 266 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ATP11AP98196 1134 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 GRSF1Q12849 480 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 MAMLD1Q13495 774 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 CCINQ13939 588 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 C15orf59Q2T9L4 293 aaPredicted RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RAB6CQ53S08 254 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 PIK3R6Q5UE93 754 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ALKBH5Q6P6C2 394 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RFWD3Q6PCD5 774 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 PHTF2Q8N3S3 785 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 NAT16Q8N8M0 369 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ATP6V0D2Q8N8Y2 350 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RNF34Q969K3 372 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ZNF653Q96CK0 615 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 MYEOVQ96EZ4 313 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 MCEEQ96PE7 176 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 PNKPQ96T60 521 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 CHP1Q99653 195 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 PRMT1Q99873 361 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RAB6CQ9H0N0 254 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 LMAN1LQ9HAT1 526 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 ANLNQ9NQW6 1124 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
SSBP3-214ENST00000533209 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 FBXO10Q9UK96 956 aa12.44□□□□□ -0.42
SSBP3-214ENST00000533209 I6L893 689 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 TRIM24O15164 1050 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 NCAM2O15394 837 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 EGFP01133 1207 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 CYBBP04839 570 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 MYBL1P10243 752 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms