RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 TNFSF9P41273 254 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 ETV4P43268 484 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 IGBP1P78318 339 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 GAD2Q05329 585 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CTC1Q2NKJ3 1217 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 ZBTB41Q5SVQ8 909 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 METTL21CQ5VZV1 264 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 OR52E8Q6IFG1 317 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 C16orf46Q6P387 395 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 FBXW8Q8N3Y1 598 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 GATA6Q92908 595 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 PBXIP1Q96AQ6 731 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 WRNIP1Q96S55 665 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 RTKNQ9BST9 563 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 ASB7Q9H672 318 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 LRRC4Q9HBW1 653 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 MORF4L1Q9UBU8 362 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CDH22Q9UJ99 828 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 E9PBE3 544 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 NEMP1O14524 444 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 B4GALT4O60513 344 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 KLHL41O60662 606 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 ERBB2P04626 1255 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CD48P09326 243 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 ATP6V1B1P15313 513 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 PSMC3P17980 439 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 IL1R2P27930 398 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 TCF7P36402 384 aaPredicted RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 CCNFP41002 786 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 ORC1Q13415 861 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 PLD5Q8N7P1 536 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 TDRD5Q8NAT2 981 aaKnown RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 HTR3CQ8WXA8 447 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CNBD2Q96M20 576 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 TUBGCP5Q96RT8 1024 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CCT7Q99832 543 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 NIFKQ9BYG3 293 aaKnown RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 VTI1BQ9UEU0 232 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 AP4E1Q9UPM8 1137 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 KAT6AQ92794 2004 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 FOCADQ5VW36 1801 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 ZNF541Q9H0D2 1346 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 WDR27A2RRH5 827 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 MTSS1O43312 755 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 SIN3BO75182 1162 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 MAFO75444 373 aaPredicted RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 MAP3K6O95382 1288 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CDH8P55286 799 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 FOLH1Q04609 750 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 GEN1Q17RS7 908 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 PQLC1Q8N2U9 271 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 LRRC71Q8N4P6 559 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 BEST2Q8NFU1 509 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 FAM136AQ96C01 138 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 GCNAQ96QF7 691 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 EBF3Q9H4W6 596 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 CHCHD3Q9NX63 227 aaKnown RBP9.67□□□□□ -0.86
BDNF-216ENST00000532997 TSPAN16Q9UKR8 245 aa9.67□□□□□ -0.86
BDNF-216ENST00000532997 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 C15orf38-AP3S2A0A0A6YYH1 394 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 TRPC5OSA6NMA1 111 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 PSMD3O43242 534 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 ME2P23368 584 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 PMLP29590 882 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 SEPT6Q14141 434 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 PACS1Q6VY07 963 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 ARMCX2Q7L311 632 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 ARPINQ7Z6K5 226 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 COLGALT1Q8NBJ5 622 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 AGR3Q8TD06 166 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 ACTRT2Q8TDY3 377 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 MCRS1Q96EZ8 462 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 SMARCAD1Q9H4L7 1026 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 FAM124BQ9H5Z6 455 aaPredicted RBP9.66□□□□□ -0.86
BDNF-216ENST00000532997 TASP1Q9H6P5 420 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 POPDC2Q9HBU9 364 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 PTTG2Q9NZH5 202 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 CNTNAP2Q9UHC6 1331 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 A0A0A0MRY4 1105 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 E5RJQ4 531 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 F5H423 210 aaPredicted RBP9.66□□□□□ -0.86
BDNF-216ENST00000532997 CYB561D2O14569 222 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 CCNT2O60583 730 aaKnown RBP9.66□□□□□ -0.86
BDNF-216ENST00000532997 CXCL8P10145 99 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 SERPINB5P36952 375 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 SLC6A3Q01959 620 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 ZNF252P-AS1Q0IIN9 211 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 PRKAA1Q13131 559 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 STX5Q13190 355 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 CYTH1Q15438 398 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 C15orf59Q2T9L4 293 aaPredicted RBP9.66□□□□□ -0.86
BDNF-216ENST00000532997 ARL13BQ3SXY8 428 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 OLFML2BQ68BL8 750 aa9.66□□□□□ -0.86
BDNF-216ENST00000532997 TIFABQ6ZNK6 161 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms