RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 APBB3O95704 486 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 LSM8O95777 96 aaKnown RBP15.99■□□□□ 0.15
CPSF1-210ENST00000532935 IGLV3-25P01717 112 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 CNR2P34972 360 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SOX5P35711 763 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SLC11A2P49281 568 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 ZNF445P59923 1031 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SRSF5Q13243 272 aaKnown RBP15.99■□□□□ 0.15
CPSF1-210ENST00000532935 IQCB1Q15051 598 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 MPPE1Q53F39 396 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 OLFML1Q6UWY5 402 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 ZNF513Q8N8E2 541 aaPredicted RBP15.99■□□□□ 0.15
CPSF1-210ENST00000532935 AZIN2Q96A70 460 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SLC39A13Q96H72 371 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SLC2A13Q96QE2 648 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 ZDHHC4Q9NPG8 344 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 NOCTQ9UK39 431 aaKnown RBP15.99■□□□□ 0.15
CPSF1-210ENST00000532935 HCN2Q9UL51 889 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SLC27A6Q9Y2P4 619 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 SGK1O00141 431 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 IRAK2O43187 625 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 ACSL4O60488 711 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 ADAM23O75077 832 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 GRAP2O75791 330 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 TRUB2O95900 331 aaKnown RBP15.98■□□□□ 0.15
CPSF1-210ENST00000532935 MMEP08473 750 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 STAT1P42224 750 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 SLC6A3Q01959 620 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 CRY1Q16526 586 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 DCAF6Q58WW2 860 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 FAM133BQ5BKY9 247 aaKnown RBP15.98■□□□□ 0.15
CPSF1-210ENST00000532935 EOGTQ5NDL2 527 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 TRMT11Q7Z4G4 463 aaKnown RBP15.98■□□□□ 0.15
CPSF1-210ENST00000532935 ZNF677Q86XU0 584 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 ZDHHC17Q8IUH5 632 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 DEFB106AQ8N104 65 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 TSTD1Q8NFU3 115 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 SLC20A1Q8WUM9 679 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 EBF1Q9UH73 591 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 CLEC4EQ9ULY5 219 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 PLXND1Q9Y4D7 1925 aa15.98■□□□□ 0.15
CPSF1-210ENST00000532935 GOLGA6L7A0A1B0GV03 622 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 AXIN1O15169 862 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 TEX33O43247 280 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 HNRNPLP14866 589 aaKnown RBP eCLIP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 HOXD9P28356 352 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 SLC6A4P31645 630 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 GABRB2P47870 512 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 SGSHP51688 502 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 DGKEP52429 567 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 NOMO3P69849 1222 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 PITX1P78337 314 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 CDK17Q00537 523 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 CDR2Q01850 454 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 SIM2Q14190 667 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 EGFLAMQ63HQ2 1017 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 NADSYN1Q6IA69 706 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 RFWD3Q6PCD5 774 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 PRR23BQ6ZRT6 265 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 SLC26A9Q7LBE3 791 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 ERICH1Q86X53 443 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 RUBCNQ92622 972 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 C18orf8Q96DM3 657 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 TMA16Q96EY4 203 aaKnown RBP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 SLC2A11Q9BYW1 496 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 IRX2Q9BZI1 471 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 FAM204AQ9H8W3 233 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
CPSF1-210ENST00000532935 RAB23Q9ULC3 237 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 DMXL1Q9Y485 3027 aa15.97■□□□□ 0.15
CPSF1-210ENST00000532935 SDK1Q7Z5N4 2213 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 CKAP5Q14008 2032 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 FAM170AA1A519 330 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 DAB1O75553 588 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 RPP40O75818 363 aaKnown RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 MOCS2O96007 188 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 APOEP02649 317 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 CHRNB2P17787 502 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 FMO1Q01740 532 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 EIF4EBP2Q13542 120 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 GEN1Q17RS7 908 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 FILIP1LQ4L180 1135 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 ZC3H12AQ5D1E8 599 aaKnown RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 PIK3R6Q5UE93 754 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 NAA35Q5VZE5 725 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 ANO7Q6IWH7 933 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 CEP68Q76N32 757 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 ANKS1BQ7Z6G8 1248 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 MSANTD4Q8NCY6 345 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 GAB3Q8WWW8 586 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 CPA5Q8WXQ8 436 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 DDX50Q9BQ39 737 aaKnown RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 HINFPQ9BQA5 517 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 CBX8Q9HC52 389 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-210ENST00000532935 THADAQ6YHU6 1953 aa15.96■□□□□ 0.15
CPSF1-210ENST00000532935 CEP192Q8TEP8 1941 aa15.96■□□□□ 0.14
CPSF1-210ENST00000532935 TBL1XO60907 577 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms