RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 C10orf53Q8N6V4 93 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 LPCAT1Q8NF37 534 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CYP4F12Q9HCS2 524 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 AHSPQ9NZD4 102 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 IFNA14P01570 189 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 PAEPP09466 180 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 TUBP50607 506 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 WSCD1Q658N2 575 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 RD3Q7Z3Z2 195 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 ARID3BQ8IVW6 561 aaPredicted RBP15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 LGI2Q8N0V4 545 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 APBB2Q92870 758 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 DUSP9Q99956 384 aaKnown RBP15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 SYT17Q9BSW7 474 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 THTPAQ9BU02 230 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 SLCO1B7G3V0H7 640 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 AP5Z1O43299 807 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 TBC1D12O60347 775 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 IGSF6O95976 241 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 TCF3P15923 654 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 MSH3P20585 1137 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 AMPD1P23109 780 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 GCNT1Q02742 428 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 WLSQ5T9L3 541 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CCDC149Q6ZUS6 474 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 MRIQ9BWK5 157 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 PABPC3Q9H361 631 aaKnown RBP15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 NRCAMQ92823 1304 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CCDC85CA6NKD9 419 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 SLC9A3R1O14745 358 aaPredicted RBP15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 BMP10O95393 424 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CREMQ03060 361 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 DLK2Q6UY11 383 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 ZNF473Q8WTR7 871 aaKnown RBP15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 VCPIP1Q96JH7 1222 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 PDZK1P1A8MUH7 402 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CD52P31358 61 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CCNG2Q16589 344 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 C10orf88Q9H8K7 445 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 ACP6Q9NPH0 428 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 FBXL21Q9UKT6 434 aa15.16■□□□□ 0.02
PCDHA9-202ENST00000532602 PSMD12O00232 456 aaPredicted RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 TRIM66O15016 1216 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 KRT20P35900 424 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 NME5P56597 212 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 DEPDC1Q5TB30 811 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 CDKAL1Q5VV42 579 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 MTSS1LQ765P7 747 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 TMEM159Q96B96 161 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 ELOVL6Q9H5J4 265 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 GPAMQ9HCL2 828 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 SLC15A5A6NIM6 579 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 DEAF1O75398 565 aaPredicted RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 PAX3P23760 479 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 HSD17B3P37058 310 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 CENPAP49450 140 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 MPP3Q13368 585 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 LRRC23Q53EV4 343 aaPredicted RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 DEFB106AQ8N104 65 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 CASP10Q92851 521 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 SENP8Q96LD8 212 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 FAM111AQ96PZ2 611 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 KCNMB3Q9NPA1 279 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 AKAP7Q9P0M2 348 aaPredicted RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 ATP5BP06576 529 aaKnown RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 PRPF39Q86UA1 669 aaKnown RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 LONP2Q86WA8 852 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 NLNQ9BYT8 704 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 LACRTQ9GZZ8 138 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 RPN2P04844 631 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 CHI3L1P36222 383 aaPredicted RBP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 NEK2P51955 445 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 CDH17Q12864 832 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 OVGP1Q12889 678 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 PCBP1Q15365 356 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 MAP4K3Q8IVH8 894 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 TRHDEQ9UKU6 1024 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 FMN2Q9NZ56 1722 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 B4GALT5O43286 388 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 PRLRP16471 622 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 COPAP53621 1224 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 SKP1P63208 163 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 POU6F1Q14863 301 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 TMEM199Q8N511 208 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 SH3GL1Q99961 368 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 NCKIPSDQ9NZQ3 722 aa15.15■□□□□ 0.02
PCDHA9-202ENST00000532602 KANSL1LA0AUZ9 987 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 E5RJQ4 531 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 EIF3HO15372 352 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF7P17097 686 aaPredicted RBP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 CYP2A7P20853 494 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 S100A5P33763 92 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 POLR2LP62875 67 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms