RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 USO1O60763 962 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 C6P13671 934 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 CPA1P15085 419 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 CHN1P15882 459 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 ZNF20P17024 532 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TACR2P21452 398 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TGM1P22735 817 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 ADRA1DP25100 572 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PSMC2P35998 433 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 PNPLA4P41247 253 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 RCAN1P53805 252 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 NXPH1P58417 271 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TAS2R50P59544 299 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 RBM6P78332 1123 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 PSG6Q00889 435 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 E2F1Q01094 437 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 SEMA3BQ13214 749 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 DNASE1L3Q13609 305 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 KCTD2Q14681 263 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PRKD1Q15139 912 aaPredicted RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 TOMM20Q15388 145 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 BAK1Q16611 211 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TXNRD1Q16881 649 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PRICKLE4Q2TBC4 344 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TBRG1Q3YBR2 411 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 HS1BP3Q53T59 392 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TEDDM1Q5T9Z0 273 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 KIAA0895LQ68EN5 471 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 ACSM6Q6P461 480 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 RHOUQ7L0Q8 258 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 P3H2Q8IVL5 708 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 Q8N1X5 172 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 FSIP1Q8NA03 581 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 TDRD7Q8NHU6 1098 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 XAGE5Q8WWM1 108 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PTCD3Q96EY7 689 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 RBM17Q96I25 401 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 FAR2Q96K12 515 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 EIF3CQ99613 913 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 SERHL2Q9H4I8 314 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 CDCP1Q9H5V8 836 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 ZNF703Q9H7S9 590 aaPredicted RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 TLR8Q9NR97 1041 aaKnown RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 AURKAIP1Q9NWT8 199 aaPredicted RBP3.33□□□□□ -1.88
CD44-234ENST00000531873 ZDHHC7Q9NXF8 308 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 KCTD5Q9NXV2 234 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 SH2B3Q9UQQ2 575 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PCDHA10Q9Y5I2 948 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 CYP46A1Q9Y6A2 500 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 SPTLC2O15270 562 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 TIMM44O43615 452 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 DHX16O60231 1041 aaKnown RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 PRAMEF2O60811 474 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 TMEM63AO94886 807 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 TJP3O95049 919 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 F9P00740 461 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 CYP3A4P08684 503 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 EGR2P11161 476 aaPredicted RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 LYL1P12980 280 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 CREB1P16220 341 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 LAG3P18627 525 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 GGT5P36269 586 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 IGHMBP2P38935 993 aaKnown RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 DIO1P49895 249 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 TPTEP56180 551 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 RAE1P78406 368 aaKnown RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 GUCY1B3Q02153 619 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 TLE3Q04726 772 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ERV3-1Q14264 604 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 KRT32Q14532 448 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ZNF569Q5MCW4 686 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 CBWD5Q5RIA9 395 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 LIPMQ5VYY2 423 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 C4orf50Q6ZRC1 276 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 PTCHD4Q6ZW05 846 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 Q6ZWC4 215 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 FASTKD5Q7L8L6 764 aaKnown RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 CHD1LQ86WJ1 897 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 RAB11FIP4Q86YS3 637 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ARHGEF19Q8IW93 802 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 PNPLA1Q8N8W4 532 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 TOR1AIP2Q8NFQ8 470 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ADAMTS15Q8TE58 950 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 SLC25A43Q8WUT9 341 aaPredicted RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 GLMPQ8WWB7 406 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 STAMQ92783 540 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ARRDC3Q96B67 414 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 PBKQ96KB5 322 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 PIGSQ96S52 555 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 FUZQ9BT04 418 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ALG8Q9BVK2 526 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 DPCDQ9BVM2 203 aaPredicted RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 USP44Q9H0E7 712 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 STN1Q9H668 368 aaKnown RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 PLEKHA5Q9HAU0 1116 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 KLC4Q9NSK0 619 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 IRAK4Q9NWZ3 460 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 CLIC5Q9NZA1 410 aa3.32□□□□□ -1.88
CD44-234ENST00000531873 ORC3Q9UBD5 711 aaPredicted RBP3.32□□□□□ -1.88
CD44-234ENST00000531873 BAG5Q9UL15 447 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms