RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 RHOT1Q8IXI2 618 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 ATP6V0D2Q8N8Y2 350 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 RPGRIP1Q96KN7 1286 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 XPO7Q9UIA9 1087 aaKnown RBP18.32■□□□□ 0.52
CTSB-222ENST00000531551 UNC80Q8N2C7 3258 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 IGLV3-27P01718 113 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 ADRA1BP35368 520 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 SLC25A11Q02978 314 aaKnown RBP18.31■□□□□ 0.52
CTSB-222ENST00000531551 NT5DC3Q86UY8 548 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 DDX42Q86XP3 938 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTSB-222ENST00000531551 CELF5Q8N6W0 485 aaKnown RBP18.31■□□□□ 0.52
CTSB-222ENST00000531551 SIK2Q9H0K1 926 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 ARHGEF38Q9NXL2 777 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 COL6A3P12111 3177 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 OBSL1O75147 1896 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 KLKB1P03952 638 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 GGCXP38435 758 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 ATP13A4Q4VNC1 1196 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 ERMARDQ5T6L9 678 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 C16orf45Q96MC5 204 aaPredicted RBP18.31■□□□□ 0.52
CTSB-222ENST00000531551 SNRNP25Q9BV90 132 aaKnown RBP18.31■□□□□ 0.52
CTSB-222ENST00000531551 MAGEB5Q9BZ81 275 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 ZFP14Q9HCL3 533 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 TMEM51Q9NW97 253 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 FZD10Q9ULW2 581 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
CTSB-222ENST00000531551 ZFP37Q9Y6Q3 630 aaPredicted RBP18.31■□□□□ 0.52
CTSB-222ENST00000531551 ANAPC1Q9H1A4 1944 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 KCNU1A8MYU2 1149 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 I6L893 689 aaPredicted RBP18.3■□□□□ 0.52
CTSB-222ENST00000531551 ENC1O14682 589 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 PAGE1O75459 146 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 KRT7P08729 469 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 RARAP10276 462 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 SLC11A2P49281 568 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 SMAD2Q15796 467 aaKnown RBP18.3■□□□□ 0.52
CTSB-222ENST00000531551 BOLA3Q53S33 107 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 ODF2Q5BJF6 829 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 EFHC2Q5JST6 749 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 TANGO2Q6ICL3 276 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
CTSB-222ENST00000531551 RIN3Q8TB24 985 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 KRT35Q92764 455 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 RSPRY1Q96DX4 576 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 BTN2A3PQ96KV6 586 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 PHF7Q9BWX1 381 aaPredicted RBP18.3■□□□□ 0.52
CTSB-222ENST00000531551 DCLK3Q9C098 648 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 DHX35Q9H5Z1 703 aaKnown RBP18.3■□□□□ 0.52
CTSB-222ENST00000531551 KIF9Q9HAQ2 790 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 AGO1Q9UL18 857 aaKnown RBP18.3■□□□□ 0.52
CTSB-222ENST00000531551 AP4E1Q9UPM8 1137 aa18.3■□□□□ 0.52
CTSB-222ENST00000531551 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 C2CD4DB7Z1M9 353 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 IL9P15248 144 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 WEE1P30291 646 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 ZNF77Q15935 545 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 CA9Q16790 459 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 PARM1Q6UWI2 310 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 PYROXD2Q8N2H3 581 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 NTAN1Q96AB6 310 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 KXD1Q9BQD3 176 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTSB-222ENST00000531551 FAM50BQ9Y247 325 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTSB-222ENST00000531551 BRWD1Q9NSI6 2320 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 GOLGA6L7A0A1B0GV03 622 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 ACSL4O60488 711 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 MARCKSL1P49006 195 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 PUS10Q3MIT2 529 aaKnown RBP18.29■□□□□ 0.52
CTSB-222ENST00000531551 PPP6R3Q5H9R7 873 aaPredicted RBP18.29■□□□□ 0.52
CTSB-222ENST00000531551 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 RAP1GAP2Q684P5 730 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 CYP4V2Q6ZWL3 525 aaPredicted RBP18.29■□□□□ 0.52
CTSB-222ENST00000531551 BBS7Q8IWZ6 715 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 UBL4BQ8N7F7 174 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 BPIFB1Q8TDL5 484 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 FGF14Q92915 247 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 CD101Q93033 1021 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 LRRC3BQ96PB8 259 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 HS3ST4Q9Y661 456 aa18.29■□□□□ 0.52
CTSB-222ENST00000531551 PSTPIP1O43586 416 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 CREB3O43889 395 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 FCARP24071 287 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
CTSB-222ENST00000531551 AIF1P55008 147 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 USP4Q13107 963 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 KRT81Q14533 505 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 RPS6KA1Q15418 735 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 HTR3DQ70Z44 454 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 CHSY1Q86X52 802 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 KCTD6Q8NC69 237 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 WDR24Q96S15 920 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 HAPLN3Q96S86 360 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 TRPV4Q9HBA0 871 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 THEGQ9P2T0 379 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 EPS15L1Q9UBC2 864 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms