RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZBTB1Q9Y2K1 713 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CLDN25C9JDP6 229 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TMX2-CTNND1H3BSU7 103 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 COPEO14579 308 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PMM2O15305 246 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 SNHG28P0DPA3 235 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 RALAP11233 206 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 JUNBP17275 347 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 MYF6P23409 242 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PTPN7P35236 360 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 ETV3P41162 512 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PSMC6P62333 389 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 MTMR2Q13614 643 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 NHSL2Q5HYW2 709 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 KRT80Q6KB66 452 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 C16orf46Q6P387 395 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 FRMD7Q6ZUT3 714 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 DNAJC10Q8IXB1 793 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 SIX6OS1Q8N1H7 587 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PACRGLQ8N7B6 248 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PIWIL2Q8TC59 973 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PNPT1Q8TCS8 783 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 STON2Q8WXE9 905 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 DDX1Q92499 740 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TFAP2CQ92754 450 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 CELF1Q92879 486 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TOP1MTQ969P6 601 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 YTHDF1Q9BYJ9 559 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 SHCBP1LQ9BZQ2 653 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 CPNE5Q9HCH3 593 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 COL14A1Q05707 1796 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 CYP3A7-CYP3A51PA0A087WV96 503 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 SYCE1LA8MT33 242 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 SLC22A2O15244 555 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 BPGMP07738 259 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 COX4I1P13073 169 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PRKCAP17252 672 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 CCNA2P20248 432 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 CYP3A7P24462 503 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 HPCAL1P37235 193 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TUBA3CQ13748 450 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 FLOT2Q14254 428 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 RAB39AQ14964 217 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 FSCBQ5H9T9 825 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 KRT28Q7Z3Y7 464 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 FAM71AQ8IYT1 594 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 MFSD2AQ8NA29 543 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 GLIS1Q8NBF1 620 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 HIPK4Q8NE63 616 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 ZUFSPQ96AP4 578 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TMEM79Q9BSE2 394 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 B3GNT4Q9C0J1 378 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 OR2B2Q9GZK3 357 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TP63Q9H3D4 680 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 AKIP1Q9NQ31 210 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 PCDHA12Q9UN75 941 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
CSDE1-214ENST00000530886 ZHX2Q9Y6X8 837 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
CSDE1-214ENST00000530886 KLHL41O60662 606 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ICMTO60725 284 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ITGAVP06756 1048 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 USP17L8P0C7I0 530 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 P2RX3P56373 397 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 MRPS5P82675 430 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 MYL7Q01449 175 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 RFTN1Q14699 578 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CHI3L2Q15782 390 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ZYXQ15942 572 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 FXNQ16595 210 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ARHGAP44Q17R89 818 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CCDC58Q4VC31 144 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF618Q5T7W0 954 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GALNT18Q6P9A2 607 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 KIF6Q6ZMV9 814 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CPNE9Q8IYJ1 553 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 KCTD17Q8N5Z5 321 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 TMCO5AQ8N6Q1 288 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 S100ZQ8WXG8 99 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 NKD2Q969F2 451 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 VMP1Q96GC9 406 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CEP295NLQ96MC4 621 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 REEP2Q9BRK0 252 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 IRF2BPLQ9H1B7 796 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SP140LQ9H930 580 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 XAB2Q9HCS7 855 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GDAP2Q9NXN4 497 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 LTBP1Q14766 1721 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF646O15015 1829 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 POTEB3A0JP26 581 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 HOXC11O43248 304 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 AKAP10O43572 662 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GMNNO75496 209 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CTRB1P17538 263 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms