RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 MYH9P35579 1960 aaKnown RBP14.55□□□□□ -0.08
PCF11-204ENST00000530660 PRSS51A0A1B0GVH4 220 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 TESPA1A2RU30 521 aaPredicted RBP14.55□□□□□ -0.08
PCF11-204ENST00000530660 USP17L10C9JJH3 530 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 GRIA3P42263 894 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 NRLP54845 237 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SPIRE1Q08AE8 756 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 IKBKEQ14164 716 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 ZNF618Q5T7W0 954 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 MFSD7Q6UXD7 560 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 MMAAQ8IVH4 418 aaKnown RBP14.55□□□□□ -0.08
PCF11-204ENST00000530660 RHOT1Q8IXI2 618 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 LILRB4Q8NHJ6 448 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 EXOC7Q9UPT5 735 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SLC27A5Q9Y2P5 690 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SNCAIPQ9Y6H5 919 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SPATA31A5Q5VU36 1347 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SPATA31A6Q5VVP1 1343 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SPATA31A7Q8IWB4 1347 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 KBTBD13C9JR72 458 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 FAM13AO94988 1023 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 C8BP07358 591 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 RFX1P22670 979 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 PPM1LQ5SGD2 360 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 SLC30A10Q6XR72 485 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 TTC30AQ86WT1 665 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 CPSF7Q8N684 471 aaKnown RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 ATP6V1E2Q96A05 226 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 THAP1Q9NVV9 213 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 SLC8A2Q9UPR5 921 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 ATP11BQ9Y2G3 1177 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 ARFGEF1Q9Y6D6 1849 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 RSL1D1O76021 490 aaKnown RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 BPGMP07738 259 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 SSTR3P32745 418 aaPredicted RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 HSPA1LP34931 641 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 RAB39AQ14964 217 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 ZNF394Q53GI3 561 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 CALML6Q8TD86 181 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 BHMTQ93088 406 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 ZNF597Q96LX8 424 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 CIB1Q99828 191 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 NPLQ9BXD5 320 aaPredicted RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 CXorf49A8MYA2 514 aaPredicted RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 ZNF701M0R085 212 aaPredicted RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 ACAT1P24752 427 aaKnown RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 IDUAP35475 653 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 SLC27A3Q5K4L6 730 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 SLC9A4Q6AI14 798 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 TATDN1Q6P1N9 297 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 KCNT2Q6UVM3 1135 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 BCAP29Q9UHQ4 241 aa14.54□□□□□ -0.08
PCF11-204ENST00000530660 FBXO9Q9UK97 447 aaPredicted RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
PCF11-204ENST00000530660 AVILO75366 819 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 PROSCO94903 275 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 SERPINB5P36952 375 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 RPL10AP62906 217 aaKnown RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 GALNT2Q10471 571 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 CEACAM7Q14002 265 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 ASPRV1Q53RT3 343 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 ZFP1Q6P2D0 407 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 C16orf46Q6P387 395 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 KCTD1Q719H9 257 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 TMEM126BQ8IUX1 230 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 HM13Q8TCT9 377 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 LENG8Q96PV6 779 aaPredicted RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 OSBPL11Q9BXB4 747 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 TP63Q9H3D4 680 aaPredicted RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 DMAC2Q9NW81 257 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 KLQ9UEF7 1012 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 A0A087WXM4 84 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 KCNA4P22459 653 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 ADSLP30566 484 aaPredicted RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 DYNLT1P63172 113 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 NFATC3Q12968 1075 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 SCARA3Q6AZY7 606 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 CHST15Q7LFX5 561 aaPredicted RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 PPIL6Q8IXY8 311 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 KATNAL2Q8IYT4 538 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 MCOLN2Q8IZK6 566 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 PDCD6IPQ8WUM4 868 aaKnown RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 LRTOMTQ8WZ04 291 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 DDX1Q92499 740 aaKnown RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 MROQ9BYG7 248 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 MRGBPQ9NV56 204 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 MTMR4Q9NYA4 1195 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 DDX60LQ5H9U9 1706 aaKnown RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 LOC105371267A0A1B0GV96 52 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 CLOCKO15516 846 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 FARP2O94887 1054 aaPredicted RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 ATP5BP06576 529 aaKnown RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 ADRA2BP18089 450 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 RFC1P35251 1148 aaPredicted RBP14.53□□□□□ -0.08
PCF11-204ENST00000530660 CDK18Q07002 472 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 GPR162Q16538 588 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 ZNF280DQ6N043 979 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 RINT1Q6NUQ1 792 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 SMIM5Q71RC9 77 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 PDIK1LQ8N165 341 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms