RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 NT5DC4Q86YG4 428 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 MIB1Q86YT6 1006 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 FAM186BQ8IYM0 893 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 CSGALNACT2Q8N6G5 542 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 NOC3LQ8WTT2 800 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 TGS1Q96RS0 853 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 CGRRF1Q99675 332 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 VN1R3Q9BXE9 311 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 SLC38A7Q9NVC3 462 aa9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 UBQLN1Q9UMX0 589 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 TDRD15B5MCY1 1934 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-217ENST00000530253 ANO9A1A5B4 782 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 NRP1O14786 923 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 LPXNO60711 386 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 LETM1O95202 739 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 ITGB1P05556 798 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 TRIM49P0CI25 452 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 TRIM49CP0CI26 452 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 NAT2P11245 290 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 CTNNB1P35222 781 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 CLCNKBP51801 687 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 RNASELQ05823 741 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 BFSP1Q12934 665 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 HSP90AA2PQ14568 343 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 TMEM132DQ14C87 1099 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 NCAPHQ15003 741 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 UPP1Q16831 310 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 ANO6Q4KMQ2 910 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 C15orf39Q6ZRI6 1047 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 INTS8Q75QN2 995 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 WDR49Q8IV35 697 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 SEC14L1Q92503 715 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 RABGGTAQ92696 567 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 DVL3Q92997 716 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 ZNF558Q96NG5 402 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 HSD3B7Q9H2F3 369 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 INTS13Q9NVM9 706 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 FRMD4BQ9Y2L6 1034 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 TRIP11Q15643 1979 aa9.4□□□□□ -0.9
CCDC90B-217ENST00000530253 NT5C1B-RDH14C9J2C7 533 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 PODXLO00592 558 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 PIRO00625 290 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 RB1P06400 928 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 CCDC192P0DO97 292 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 EPB41P11171 864 aaKnown RBP9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 PPM1AP35813 382 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 OR1G1P47890 313 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 SOX9P48436 509 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 GIPRP48546 466 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 VAMP7P51809 220 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 PPP3CAQ08209 521 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 CAMK1Q14012 370 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 C9orf57Q5W0N0 161 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 TRIM59Q8IWR1 403 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 BEST2Q8NFU1 509 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 SLC35C1Q96A29 364 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 CNOT6LQ96LI5 555 aaKnown RBP9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 UROC1Q96N76 676 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 BPIFA3Q9BQP9 254 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 MTUS1Q9ULD2 1270 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 INVSQ9Y283 1065 aa9.39□□□□□ -0.91
CCDC90B-217ENST00000530253 PLXNA4Q9HCM2 1894 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 TSC2P49815 1807 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 A0A1W2PQH9 124 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ANKRD34BA5PLL1 514 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 H3BNC9 293 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 GRM6O15303 877 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 FGF18O76093 207 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 VNN1O95497 513 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 C4BPAP04003 597 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 DLATP10515 647 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ZNF16P17020 682 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ZNF18P17022 549 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 DNAJB1P25685 340 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 SLC6A11P48066 632 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 TFAMQ00059 246 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 MYL5Q02045 173 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 IQCB1Q15051 598 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ZACNQ401N2 412 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 SPOUT1Q5T280 376 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 CD300LDQ6UXZ3 194 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 TRAPPC11Q7Z392 1133 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 SPPL3Q8TCT6 385 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 GDPD5Q8WTR4 605 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ARNTL2Q8WYA1 636 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms