RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 CFAP57Q96MR6 1250 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 MCEEQ96PE7 176 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 PANX2Q96RD6 677 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 TBCBQ99426 244 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 CHP1Q99653 195 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 IRX2Q9BZI1 471 aaPredicted RBP5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 FAM204AQ9H8W3 233 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 NHEJ1Q9H9Q4 299 aaPredicted RBP5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 TBC1D17Q9HA65 648 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 LTB4R2Q9NPC1 389 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 SPHK2Q9NRA0 654 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 PIGVQ9NUD9 493 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 TMEM51Q9NW97 253 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 ZNHIT6Q9NWK9 470 aaKnown RBP5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 DDIT4Q9NX09 232 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 FBXL21Q9UKT6 434 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 AGO1Q9UL18 857 aaKnown RBP5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 STAP1Q9ULZ2 295 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 CKAP5Q14008 2032 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 FANCMQ8IYD8 2048 aa5.89□□□□□ -1.47
RPUSD4-204ENST00000530036 KANSL1LA0AUZ9 987 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ANKRD62A6NC57 917 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 I6L893 689 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 MAN2B1O00754 1011 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 TRDMT1O14717 391 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CACNG3O60359 315 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ACSL4O60488 711 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 LCA5LO95447 670 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 F9P00740 461 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PENKP01210 267 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 APOEP02649 317 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CYP1A2P05177 515 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 SLC2A3P11169 496 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CHRM1P11229 460 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ADH5P11766 374 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PDGFRAP16234 1089 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 AOC1P19801 751 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 GPD1P21695 349 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CD72P21854 359 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 SDC4P31431 198 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 SLC6A4P31645 630 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CCR1P32246 355 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 GBP1P32455 592 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 DEKP35659 375 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CHKAP35790 457 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 EIF2DP41214 584 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 SLC11A2P49281 568 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CLCN5P51795 746 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ZNF143P52747 638 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 VCPP55072 806 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 RNASE9P60153 205 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 OGDHQ02218 1023 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 GFPT1Q06210 699 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ZNF252P-AS1Q0IIN9 211 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 NR1H3Q13133 447 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 MTA1Q13330 715 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 FZD5Q13467 585 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CCINQ13939 588 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 TSR1Q2NL82 804 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 C15orf59Q2T9L4 293 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CCDC14Q49A88 953 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ZC3H12AQ5D1E8 599 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 BRMS1LQ5PSV4 323 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CCDC122Q5T0U0 273 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ARTNQ5T4W7 220 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ADGRF1Q5T601 910 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PIK3R6Q5UE93 754 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 FYB2Q5VWT5 728 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 NAIF1Q69YI7 327 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ZNF852Q6ZMS4 543 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 STRADAQ7RTN6 431 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PHLDB2Q86SQ0 1253 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 C12orf40Q86WS4 652 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 TMEM25Q86YD3 366 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 TMEM139Q8IV31 216 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CCDC105Q8IYK2 499 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PHTF2Q8N3S3 785 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 FBXL6Q8N531 539 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PJA1Q8NG27 643 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 TTC8Q8TAM2 541 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 FNIP1Q8TF40 1166 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 RXFP2Q8WXD0 754 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ZNF653Q96CK0 615 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PRICKLE1Q96MT3 831 aaPredicted RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PRMT1Q99873 361 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CNPY3Q9BT09 278 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 SELENOOQ9BVL4 669 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 OSBPL6Q9BZF3 934 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 FOXQ1Q9C009 403 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 PARVAQ9NVD7 372 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 ARHGEF38Q9NXL2 777 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 DLGAP2Q9P1A6 1054 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 IMPACTQ9P2X3 320 aa5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 CNOT8Q9UFF9 292 aaKnown RBP5.88□□□□□ -1.47
RPUSD4-204ENST00000530036 XPO7Q9UIA9 1087 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms