RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 DENND1CQ8IV53 801 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 CAGE1Q8TC20 777 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 ESR2Q92731 530 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 EXTL1Q92935 676 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 FAM227BQ96M60 508 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 NT5C1BQ96P26 610 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 C1orf43Q9BWL3 253 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 SLAMF7Q9NQ25 335 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 KMT5AQ9NQR1 393 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 COMMD10Q9Y6G5 202 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 CCDC171Q6TFL3 1326 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 TRANK1O15050 2925 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 SCN10AQ9Y5Y9 1956 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 CDHR4A6H8M9 788 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 DRGXA6NNA5 263 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 F2RL2O00254 374 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 MUSKO15146 869 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 PJA2O43164 708 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 TEX33O43247 280 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 POMCP01189 267 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 ITGB1P05556 798 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 IQCF3P0C7M6 154 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 SNHG28P0DPA3 235 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 ZNF20P17024 532 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 HTR1BP28222 390 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 HAND2P61296 217 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 CDSNQ15517 529 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 PTGISQ16647 500 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 USH1GQ495M9 461 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 FLYWCH1Q4VC44 716 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 ZNF589Q86UQ0 364 aaPredicted RBP5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 IQCA1Q86XH1 822 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 DGKHQ86XP1 1220 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 HERC6Q8IVU3 1022 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 CELF5Q8N6W0 485 aaKnown RBP5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 ZFP28Q8NHY6 868 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 AFAP1L1Q8TED9 768 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 NDC1Q9BTX1 674 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 KAT14Q9H8E8 782 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 LMBRD1Q9NUN5 540 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 OBP2AQ9NY56 170 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 CALCOCO1Q9P1Z2 691 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 SLC45A2Q9UMX9 530 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 PCDHA1Q9Y5I3 950 aa5.79□□□□□ -1.48
AMBRA1-209ENST00000529963 ABCB11O95342 1321 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 XIRP2A4UGR9 3374 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 LCTP09848 1927 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ZNF318Q5VUA4 2279 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 NT5C1B-RDH14C9J2C7 533 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ZNF213O14771 459 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 FAM20BO75063 409 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ARIH2O95376 493 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 GH1P01241 217 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 MMP3P08254 477 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 GOLGA8HP0CJ92 632 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 CASTP20810 708 aaKnown RBP5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 RRP1P56182 461 aaKnown RBP5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ADAM17P78536 824 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 NHLH2Q02577 135 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 EFEMP1Q12805 493 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 BRD3Q15059 726 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 STXBP2Q15833 593 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 CDC37Q16543 378 aaPredicted RBP5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ASPRV1Q53RT3 343 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 THEMIS2Q5TEJ8 643 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 SEPT14Q6ZU15 432 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 SESTD1Q86VW0 696 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 TBC1D10CQ8IV04 446 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 SAMD3Q8N6K7 520 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 TTC9BQ8N6N2 239 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 AFG1LQ8WV93 481 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ARNTL2Q8WYA1 636 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 DVL3Q92997 716 aaPredicted RBP5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 RILPL2Q969X0 211 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 IWS1Q96ST2 819 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 NEU1Q99519 415 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 KATNAL1Q9BW62 490 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 TEX101Q9BY14 249 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 UBA5Q9GZZ9 404 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 ZNF700Q9H0M5 742 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 CERS4Q9HA82 394 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 SORCS3Q9UPU3 1222 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 POLHQ9Y253 713 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 MRPL11Q9Y3B7 192 aaKnown RBP5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 MTCH2Q9Y6C9 303 aa5.78□□□□□ -1.48
AMBRA1-209ENST00000529963 PRRC2BQ5JSZ5 2229 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 GBF1Q92538 1859 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 ZNF185O15231 689 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 B3GALT2O43825 422 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 DHX16O60231 1041 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 AHSGP02765 367 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 RNASE9P60153 205 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 TFF2Q03403 129 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 TAP1Q03518 808 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 ARHGAP1Q07960 439 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 LY6KQ17RY6 165 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms