RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 PIK3C2GO75747 1445 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 PPLO60437 1756 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 RTL1A6NKG5 1358 aa4.27□□□□□ -1.73
CTR9-205ENST00000529898 IQSEC2Q5JU85 1478 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 LINC00854A0A1B0GVQ3 168 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 FAM170AA1A519 330 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 CDHR4A6H8M9 788 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PCDHGA12O60330 932 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SHOX2O60902 331 aaPredicted RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 PROP1O75360 226 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SLC43A1O75387 559 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SKAP2O75563 359 aaPredicted RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 B3GALNT1O75752 331 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 RASSF9O75901 435 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 HAUS5O94927 633 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ADCY5O95622 1261 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 IDEP14735 1019 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 CPA3P15088 417 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 C5AR1P21730 350 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 EDNRBP24530 442 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 HSPA4P34932 840 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 KRT9P35527 623 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PLA2G5P39877 138 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SERPINB8P50452 374 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 CLCN2P51788 898 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 MRPS21P82921 87 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 DMPKQ09013 629 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 STK3Q13188 491 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 BLMHQ13867 455 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PTPN14Q15678 1187 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ELF2Q15723 593 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 NDUFA5Q16718 116 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SGSM1Q2NKQ1 1148 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 CCDC183Q5T5S1 534 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 THEMIS2Q5TEJ8 643 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ARMC3Q5W041 872 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 IRGCQ6NXR0 463 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 HOOK3Q86VS8 718 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SLC15A3Q8IY34 581 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 FAM186BQ8IYM0 893 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 LINC00469Q8N7U9 141 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 BOLLQ8N9W6 283 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 NSUN7Q8NE18 718 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 TNIP2Q8NFZ5 429 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 LILRB1Q8NHL6 650 aaPredicted RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 TBC1D31Q96DN5 1066 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PTCD3Q96EY7 689 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 COG3Q96JB2 828 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 TMX3Q96JJ7 454 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 C8orf48Q96LL4 319 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 CCDC28BQ9BUN5 200 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 DUSP26Q9BV47 211 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 NSRP1Q9H0G5 558 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 GOLPH3LQ9H4A5 285 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 DCTPP1Q9H773 170 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 TCP11L1Q9NUJ3 509 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 AIPL1Q9NZN9 384 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 VSX1Q9NZR4 365 aaPredicted RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 JKAMPQ9P055 326 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ZNF69Q9UC07 566 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 SAP30BPQ9UHR5 308 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 HERC5Q9UII4 1024 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 TLK1Q9UKI8 766 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ZNF215Q9UL58 517 aaPredicted RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 CCPG1Q9ULG6 757 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 G3BP2Q9UN86 482 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 DMTF1Q9Y222 760 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 RUVBL1Q9Y265 456 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 SLC45A1Q9Y2W3 748 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 MTO1Q9Y2Z2 717 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 NEU2Q9Y3R4 380 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PCDHGA9Q9Y5G4 932 aaKnown RBP4.26□□□□□ -1.73
CTR9-205ENST00000529898 PCDHGA8Q9Y5G5 932 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PCDHGA7Q9Y5G6 932 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PCDHGA6Q9Y5G7 932 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 PCDHGA3Q9Y5H0 932 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 FAM169AQ9Y6X4 670 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 RTEL1-TNFRSF6BF6WH68 1400 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 AK9Q5TCS8 1911 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ADGRB2O60241 1585 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 VWDEQ8N2E2 1590 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ZFYVE16Q7Z3T8 1539 aa4.26□□□□□ -1.73
CTR9-205ENST00000529898 ZCCHC11Q5TAX3 1644 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 A0A0B4J203 849 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 HTR3EA5X5Y0 456 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 H0Y3Z8 333 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 CASQ2O14958 399 aaPredicted RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 HTRA2O43464 458 aaPredicted RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 ZNF254O75437 659 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 IGLV2-14P01704 120 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 GSTA2P09210 222 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 MTHFD1P11586 935 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 SFTPCP11686 197 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 BTF3P20290 206 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 ALDH3A1P30838 453 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 HOXC13P31276 330 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 FOLR3P41439 243 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 LIFRP42702 1097 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 PTH2RP49190 550 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 MRPS35P82673 323 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms