RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 WDR24Q96S15 920 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 RTKNQ9BST9 563 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 PNMA2Q9UL42 364 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 FER1L4A9Z1Z3 1794 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 POC1B-GALNT4F8VUJ3 575 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 PPP6CO00743 305 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 SPRY2O43597 315 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 SNX2O60749 519 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 CBFA2T3O75081 653 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 TAF5LO75529 589 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 LATS1O95835 1130 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 AGR2O95994 175 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 CKMT1AP12532 417 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 KELP23276 732 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 DIO1P49895 249 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 LMAN2Q12907 356 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 FAM187BQ17R55 369 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 SUPT20HL1Q3ZLR7 823 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 DENND2CQ68D51 928 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 ZNF626Q68DY1 528 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 CLEC9AQ6UXN8 241 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 CNGA4Q8IV77 575 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 FTSJ3Q8IY81 847 aaKnown RBP5.24□□□□□ -1.57
C11orf88-204ENST00000529661 GALNT4Q8N4A0 578 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 METTL25Q8N6Q8 603 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 TEX19Q8NA77 164 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 RUBCNQ92622 972 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 USP13Q92995 863 aaPredicted RBP5.24□□□□□ -1.57
C11orf88-204ENST00000529661 GRAMD1AQ96CP6 724 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 QTRT1Q9BXR0 403 aaKnown RBP5.24□□□□□ -1.57
C11orf88-204ENST00000529661 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 SEMA4CQ9C0C4 833 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 TWSG1Q9GZX9 223 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 PRDM16Q9HAZ2 1276 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 NRIP3Q9NQ35 241 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 FSCN3Q9NQT6 498 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 MGAT4CQ9UBM8 478 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 RIMKLBQ9ULI2 386 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 SLC27A6Q9Y2P4 619 aa5.24□□□□□ -1.57
C11orf88-204ENST00000529661 PNMA6EA0A0J9YXQ4 647 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM90A18PA6NE21 464 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM90A16PA6NEW6 464 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 HMX3A6NHT5 357 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM90A9PA6NNJ1 464 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM90A5PA8MXJ8 464 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 J3KTA2 159 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 TMPRSS11DO60235 418 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 TUBB4AP04350 444 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 CHRM5P08912 532 aaPredicted RBP5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM90A15PP0C7V4 464 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM90A14PP0C7W9 464 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 KLRK1P26718 216 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 HTR7P34969 479 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 ARHGAP25P42331 645 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 CDK7P50613 346 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 ZNF81P51508 661 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 CLCA4Q14CN2 919 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 ACOX1Q15067 660 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FAM110CQ1W6H9 321 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 SLC18B1Q6NT16 456 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 RINT1Q6NUQ1 792 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 MIS18BP1Q6P0N0 1132 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 NEK8Q86SG6 692 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 OR6Y1Q8NGX8 325 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 WDR60Q8WVS4 1066 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 CTHRC1Q96CG8 243 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 CCDC17Q96LX7 622 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 FYTTD1Q96QD9 318 aaKnown RBP5.23□□□□□ -1.57
C11orf88-204ENST00000529661 VPS16Q9H269 839 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 PDGFCQ9NRA1 345 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 ASIC5Q9NY37 505 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 NKX1-2Q9UD57 310 aaPredicted RBP5.23□□□□□ -1.57
C11orf88-204ENST00000529661 DAPP1Q9UN19 280 aa5.23□□□□□ -1.57
C11orf88-204ENST00000529661 TCRBV5S1A1TA0A578 114 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 RRN3P2A6NIE6 340 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 EYA2O00167 538 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 CYP2A6P11509 494 aaPredicted RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 CD19P15391 556 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 RBL1P28749 1068 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 MTAPQ13126 283 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 CUL4BQ13620 913 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 TAF12Q16514 161 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 ADCK5Q3MIX3 580 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 AWAT1Q58HT5 328 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 INTS11Q5TA45 600 aaKnown RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 JAKMIP3Q5VZ66 844 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 TMEM65Q6PI78 240 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 SLC2A7Q6PXP3 512 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 FSTL5Q8N475 847 aaPredicted RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 C8orf58Q8NAV2 365 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 MAFAQ8NHW3 353 aaPredicted RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 ADAMTS18Q8TE60 1221 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 THAP4Q8WY91 577 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 SMG7Q92540 1137 aaKnown RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 RILPL2Q969X0 211 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 PPM1MQ96MI6 270 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 HS6ST2Q96MM7 605 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 ZNF778Q96MU6 729 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 TRAPPC9Q96Q05 1148 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms