RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 BNIP1Q12981 228 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 RHBDF2Q6PJF5 856 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 ALLCQ8N6M5 410 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 URGCPQ8TCY9 931 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 ELAC2Q9BQ52 826 aaKnown RBP17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 PCDH18Q9HCL0 1135 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 ATXN10Q9UBB4 475 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 HCSTQ9UBK5 93 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 DSEQ9UL01 958 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 ZNF148Q9UQR1 794 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 DRG1Q9Y295 367 aaKnown RBP17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 PRG3Q9Y2Y8 225 aaPredicted RBP17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 DAB1O75553 588 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 GSTA2P09210 222 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 ACADSP16219 412 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 BDNFP23560 247 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 OR1G1P47890 313 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 YWHAZP63104 245 aaKnown RBP17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 SYPL2Q5VXT5 272 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 NPNTQ6UXI9 565 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 SIX6OS1Q8N1H7 587 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 CCDC185Q8N715 623 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 MDM1Q8TC05 714 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 SMARCD1Q96GM5 515 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 SNF8Q96H20 258 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 CSNK1G1Q9HCP0 422 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 AAASQ9NRG9 546 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 PCDHB8Q9UN66 801 aa17.3■□□□□ 0.36
CAPRIN1-207ENST00000529307 YJEFN3A6XGL0 299 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 MDM4O15151 490 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 PDHA1P08559 390 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 TYMPP19971 482 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 ADCY8P40145 1251 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 DAOAP59103 153 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 DCAF6Q58WW2 860 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 OR52E8Q6IFG1 317 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 BHLHA9Q7RTU4 235 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 GSTA5Q7RTV2 222 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 BNIPLQ7Z465 357 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 LRRC34Q8IZ02 419 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 CRIPAKQ8N1N5 446 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 UBLCP1Q8WVY7 318 aaPredicted RBP17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 NT5C3BQ969T7 300 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 SLC2A13Q96QE2 648 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 CCDC134Q9H6E4 229 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 STK38LQ9Y2H1 464 aa17.29■□□□□ 0.36
CAPRIN1-207ENST00000529307 USP17L7P0C7H9 530 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ATF2P15336 505 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 PAX3P23760 479 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ITGA8P53708 1063 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 CCL23P55773 120 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 KRT71Q3SY84 523 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ASRGL1Q7L266 308 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 LCA5Q86VQ0 697 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 PQLC3Q8N755 202 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 RNF157Q96PX1 679 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ELAC1Q9H777 363 aaKnown RBP17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 MTMR10Q9NXD2 777 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 SCN5AQ14524 2016 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 TMEM189-UBE2V1I3L0A0 370 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 APOC4-APOC2K7ER74 178 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 APOC2P02655 101 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ITGAVP06756 1048 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 OR4Q2P0C623 313 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 COL6A1P12109 1028 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 CHN1P15882 459 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 ITIH2P19823 946 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 CHKAP35790 457 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 SULT1E1P49888 294 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 GDF10P55107 478 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 BCAR1P56945 870 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 CALCOCO2Q13137 446 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 KRT81Q14533 505 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 RNF220Q5VTB9 566 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 SLC39A5Q6ZMH5 540 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 STRADAQ7RTN6 431 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 PCDH19Q8TAB3 1148 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 SEPT8Q92599 483 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 NPY6RQ99463 290 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 NRDE2Q9H7Z3 1164 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 KANSL3Q9P2N6 904 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 PCDHB7Q9Y5E2 793 aa17.28■□□□□ 0.36
CAPRIN1-207ENST00000529307 CALB2P22676 271 aa17.27■□□□□ 0.36
CAPRIN1-207ENST00000529307 L1CAMP32004 1257 aa17.27■□□□□ 0.36
CAPRIN1-207ENST00000529307 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.36
CAPRIN1-207ENST00000529307 PDK2Q15119 407 aa17.27■□□□□ 0.36
CAPRIN1-207ENST00000529307 IRGCQ6NXR0 463 aa17.27■□□□□ 0.36
CAPRIN1-207ENST00000529307 ANKRD33Q7Z3H0 272 aa17.27■□□□□ 0.36
CAPRIN1-207ENST00000529307 FAM131BQ86XD5 332 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms