RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 EIF2AQ9BY44 585 aaKnown RBP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 ACTRT3Q9BYD9 372 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 NYXQ9GZU5 481 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 ZNF212Q9UDV6 495 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 SH2B3Q9UQQ2 575 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 TBC1D30Q9Y2I9 924 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 MRPS17Q9Y2R5 130 aaKnown RBP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 FER1L6Q2WGJ9 1857 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 ANKRD31Q8N7Z5 1873 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 SNED1Q8TER0 1413 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 BCORQ6W2J9 1755 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 RNF123Q5XPI4 1314 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 MAP3K15Q6ZN16 1313 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 AQP7P3A6NL99 342 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 NPHP1O15259 732 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 CD3EAPO15446 510 aaKnown RBP5.58□□□□□ -1.52
CSDE1-212ENST00000529046 ORC4O43929 436 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 CACNA2D1P54289 1103 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 BCAT1P54687 386 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 KRT72Q14CN4 511 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 PARP10Q53GL7 1025 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 SLC10A5Q5PT55 438 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 ZNF362Q5T0B9 420 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-212ENST00000529046 USP17L6PQ6QN14 398 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 KIAA0408Q6ZU52 694 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 RNF44Q7L0R7 432 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 ABRAQ8N0Z2 381 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 RSPRY1Q96DX4 576 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 ZDHHC12Q96GR4 267 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 TPSD1Q9BZJ3 242 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 ZSCAN32Q9NX65 697 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 VPS51Q9UID3 782 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 SERTAD3Q9UJW9 196 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 GABRQQ9UN88 632 aa5.58□□□□□ -1.52
CSDE1-212ENST00000529046 NIP7Q9Y221 180 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSDE1-212ENST00000529046 ARFGEF2Q9Y6D5 1785 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PASKQ96RG2 1323 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 DICER1Q9UPY3 1922 aaKnown RBP5.57□□□□□ -1.52
CSDE1-212ENST00000529046 ABHD14A-ACY1A0A1B0GW23 586 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 ADM5C9JUS6 153 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 H7C4K7 107 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PPM1DO15297 605 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 TLR5O60602 858 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PLA2G6O60733 806 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 RASSF9O75901 435 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 DDNO94850 711 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-212ENST00000529046 TJP3O95049 919 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 C1RP00736 705 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 MYL4P12829 197 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 GABRB3P28472 473 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PTDSS1P48651 473 aaKnown RBP5.57□□□□□ -1.52
CSDE1-212ENST00000529046 COPAP53621 1224 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 C21orf58P58505 322 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 SP2Q02086 613 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 LMOD3Q0VAK6 560 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 DCTN1Q14203 1278 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 RALBP1Q15311 655 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 HLFQ16534 295 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PTCHD3Q3KNS1 767 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 ARL13BQ3SXY8 428 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 CERCAMQ5T4B2 595 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 TEDDM1Q5T9Z0 273 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 TSHZ1Q6ZSZ6 1077 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PPP1R42Q7Z4L9 355 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 KCTD20Q7Z5Y7 419 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 KRT73Q86Y46 540 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 LIX1LQ8IVB5 337 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 SLC15A3Q8IY34 581 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 ZNF34Q8IZ26 560 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 GPC2Q8N158 579 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 B3GALNT2Q8NCR0 500 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 TOR1AIP2Q8NFQ8 470 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 SOCS4Q8WXH5 440 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 FBXL20Q96IG2 436 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 ZNF668Q96K58 619 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-212ENST00000529046 PBKQ96KB5 322 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 FAM227BQ96M60 508 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 RPS6KC1Q96S38 1066 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 TAF1DQ9H5J8 278 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-212ENST00000529046 SLC17A6Q9P2U8 582 aa5.57□□□□□ -1.52
CSDE1-212ENST00000529046 SLX4Q8IY92 1834 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 OR2W5A6NFC9 320 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 SLC16A3O15427 465 aaKnown RBP5.56□□□□□ -1.52
CSDE1-212ENST00000529046 IGLV2-14P01704 120 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 RHOP08100 348 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 SETSIPP0DME0 302 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 KRT17Q04695 432 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 CCNIQ14094 377 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 MPEG1Q2M385 716 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 ZNF618Q5T7W0 954 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 KAZNQ674X7 775 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 MAVSQ7Z434 540 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 CCDC33Q8N5R6 958 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 PMM1Q92871 262 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 PPP2R3CQ969Q6 453 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 KIAA1191Q96A73 305 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 FKBP10Q96AY3 582 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 ADARB2Q9NS39 739 aaKnown RBP5.56□□□□□ -1.52
CSDE1-212ENST00000529046 SEMA4GQ9NTN9 838 aa5.56□□□□□ -1.52
CSDE1-212ENST00000529046 TAGLN3Q9UI15 199 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms