RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 ZNF570Q96NI8 536 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 TBC1D10AQ9BXI6 508 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 ELOVL4Q9GZR5 314 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 MTIF3Q9H2K0 278 aaKnown RBP9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 SMARCAD1Q9H4L7 1026 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 PRDM16Q9HAZ2 1276 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 NPHS2Q9NP85 383 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 IL23AQ9NPF7 189 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 SIX4Q9UIU6 781 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 CHMP2BQ9UQN3 213 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 NOD1Q9Y239 953 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 TTLL3Q9Y4R7 772 aa9.6□□□□□ -0.87
AP003063.1-201ENST00000528496 TCRBV7S3A2A0A539 114 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TCRBV9S1A1TA0A576 114 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 C2CD4BA6NLJ0 364 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ZBTB42B2RXF5 422 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 H7C0C1 242 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 NOP56O00567 594 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 APOL1O14791 398 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 PRPSAP2O60256 369 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 KRT37O76014 449 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 KRT19P08727 400 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 RPSAP08865 295 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SNRPAP09012 282 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SRGAP2CP0DJJ0 459 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TPBGLP0DKB5 382 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ACRP10323 421 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TPSB2P20231 275 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 PRKCHP24723 683 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CNTFP26441 200 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SCNN1AP37088 669 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 GPD2P43304 727 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ATP5OP48047 213 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SERPINB9P50453 376 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CDH6P55285 790 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CCL23P55773 120 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 YWHAZP63104 245 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 GAD2Q05329 585 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 NAA25Q14CX7 972 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TAF11Q15544 211 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TPSAB1Q15661 275 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TBCCQ15814 346 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CTC1Q2NKJ3 1217 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TSNAXIP1Q2TAA8 658 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 BOLA3Q53S33 107 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ZNF484Q5JVG2 852 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TMEM240Q5SV17 173 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 FAM102AQ5T9C2 384 aaPredicted RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 EEF1DP3Q658K8 133 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ATG16L1Q676U5 607 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ZNF449Q6P9G9 518 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 LCLAT1Q6UWP7 414 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SH2D5Q6ZV89 423 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CDKL3Q8IVW4 592 aaPredicted RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 KIAA0319LQ8IZA0 1049 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 C1orf127Q8N9H9 656 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 FAM71DQ8N9W8 422 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 PPTC7Q8NI37 304 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 HSPH1Q92598 858 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 FAF2Q96CS3 445 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 PTCD3Q96EY7 689 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 THOC1Q96FV9 657 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 NSL1Q96IY1 281 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 C7orf26Q96N11 449 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 RNF157Q96PX1 679 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ZNF670Q9BS34 389 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 BTBD10Q9BSF8 475 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 KATNAL1Q9BW62 490 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CALN1Q9BXU9 219 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 GCOM2Q9BZD3 368 aaPredicted RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 KLC2Q9H0B6 622 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SMYD3Q9H7B4 428 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 DCLRE1BQ9H816 532 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 TRMT13Q9NUP7 481 aaKnown RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 MTMR10Q9NXD2 777 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 CNTN3Q9P232 1028 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 KANSL3Q9P2N6 904 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 SLC17A7Q9P2U7 560 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 ITGA11Q9UKX5 1188 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 BARX2Q9UMQ3 279 aaPredicted RBP9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 LRRC42Q9Y546 428 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 COL1A2P08123 1366 aa9.59□□□□□ -0.87
AP003063.1-201ENST00000528496 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 I3L4J1 428 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 INO80B-WBP1J3KQ70 363 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 COPEO14579 308 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 MDM4O15151 490 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 ZNF189O75820 626 aaPredicted RBP9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 CBX6O95503 412 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 FGBP02675 491 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 NFICP08651 508 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 CD48P09326 243 aa9.58□□□□□ -0.88
AP003063.1-201ENST00000528496 CXCL8P10145 99 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms