RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 DCLK3Q9C098 648 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 UBE2OQ9C0C9 1292 aaKnown RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 VCXQ9H320 206 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 LRRC19Q9H756 370 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 PCYOX1Q9UHG3 505 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 STK38LQ9Y2H1 464 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 HHLA1C9JL84 531 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 CAPN9O14815 690 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 HOXA2O43364 376 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 CST8O60676 142 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 UBOX5O94941 541 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 OAZ2O95190 189 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 PDHA1P08559 390 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 ATP6V1C1P21283 382 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 MATKP42679 507 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 SULT1E1P49888 294 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 KLC1Q07866 573 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 CA9Q16790 459 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 FAM131BQ86XD5 332 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 MDM1Q8TC05 714 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 BCL7CQ8WUZ0 217 aaPredicted RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 ELAC2Q9BQ52 826 aaKnown RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 ERP44Q9BS26 406 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 NEUROG2Q9H2A3 272 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 DPYSL4O14531 572 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 ZBED1O96006 694 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 RAG1P15918 1043 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 DESP17661 470 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 PAX3P23760 479 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 GBP1P32455 592 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 ALDH7A1P49419 539 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 VPS41P49754 854 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 MTMR3Q13615 1198 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 KRT81Q14533 505 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 CMPK2Q5EBM0 449 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 FUT10Q6P4F1 479 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 RFX6Q8HWS3 928 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 RAB17Q9H0T7 212 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 C10orf88Q9H8K7 445 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 CSNK1G1Q9HCP0 422 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 ARHGEF3Q9NR81 526 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 ABCF3Q9NUQ8 709 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 DNPEPQ9ULA0 475 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 NCAM1P13591 858 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 SP100P23497 879 aaPredicted RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 DAOAP59103 153 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 DEFB103AP81534 67 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 SFSWAPQ12872 951 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 SF3A3Q12874 501 aaKnown RBP eCLIP13.23□□□□□ -0.292e-8■□□□□ 10.5
ATG13-211ENST00000528494 CUL1Q13616 776 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 MYBPC3Q14896 1274 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 MAPRE1Q15691 268 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 DDR2Q16832 855 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 FAM182AQ5T1J6 154 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 SPOUT1Q5T280 376 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 TRIM42Q8IWZ5 723 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 CCDC185Q8N715 623 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 ATAD1Q8NBU5 361 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 UBLCP1Q8WVY7 318 aaPredicted RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 SNRNP25Q9BV90 132 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
ATG13-211ENST00000528494 POPDC2Q9HBU9 364 aa13.23□□□□□ -0.29
ATG13-211ENST00000528494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATG13-211ENST00000528494 M0QYT0 321 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 SOAT2O75908 522 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 WFS1O76024 890 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 TIMP1P01033 207 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 FYNP06241 537 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 GNAZP19086 355 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 PTPN9P43378 593 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 GPR15P49685 360 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 COPS2P61201 443 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 KRT17Q04695 432 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 SLC25A52Q3SY17 297 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 KRT71Q3SY84 523 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 BOLA3Q53S33 107 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 RNF220Q5VTB9 566 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 RSPO2Q6UXX9 243 aaPredicted RBP13.22□□□□□ -0.29
ATG13-211ENST00000528494 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 OTOP2Q7RTS6 562 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 GSTA5Q7RTV2 222 aa13.22□□□□□ -0.29
ATG13-211ENST00000528494 LRRC43Q8N309 656 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms