RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 KIAA1549LQ6ZVL6 1849 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 PIEZO1Q92508 2521 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 CCDC163A0A0D9SF12 145 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ANTXRLA6NF34 631 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 NDUFS2O75306 463 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 GRAP2O75791 330 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 KLKB1P03952 638 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ACADMP11310 421 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 SDHBP21912 280 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF132P52740 706 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 RNASE9P60153 205 aaKnown RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 CDK17Q00537 523 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 PDCLQ13371 301 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 CDH18Q13634 790 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 DRAP1Q14919 205 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 TRIP4Q15650 581 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 RSPO4Q2I0M5 234 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 DCAF6Q58WW2 860 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 TCP11X2Q5H9J9 407 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 CT47A1Q5JQC4 288 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 IL31Q6EBC2 164 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 SERPINA13PQ6UXR4 307 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 Q6ZNB5 142 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 LPCAT2Q7L5N7 544 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 DGLUCYQ7Z3D6 616 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 MFN1Q8IWA4 741 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ETFBKMTQ8IXQ9 262 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 CARNMT1Q8N4J0 409 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF276Q8N554 614 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ATP6V0D2Q8N8Y2 350 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 DQX1Q8TE96 717 aaKnown RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 NELL1Q92832 810 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ZSWIM1Q9BR11 485 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 POPDC2Q9HBU9 364 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 PLCB1Q9NQ66 1216 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 SEMA4GQ9NTN9 838 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 NAALADL1Q9UQQ1 740 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 FHOD1Q9Y613 1164 aa9.45□□□□□ -0.9
CMTM1-210ENST00000528441 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 ZFHX2Q9C0A1 2572 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-210ENST00000528441 FAM186AA6NE01 2351 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 BECN2A8MW95 431 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 PRR5-ARHGAP8B1AHC4 643 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 H0Y626 953 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ACSL4O60488 711 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 MOCS3O95396 460 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 EPHX1P07099 455 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ABCB4P21439 1286 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 HOXA6P31267 233 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 MPLP40238 635 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 GPD2P43304 727 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ST8SIA6P61647 398 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 TPM4P67936 248 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ARHGAP8P85298 464 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 MYL5Q02045 173 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 RPL6Q02878 288 aaKnown RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 NME3Q13232 169 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 PLK5Q496M5 336 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 PKDCCQ504Y2 493 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 EFHC1Q5JVL4 640 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 RNF219Q5W0B1 726 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 CAVIN1Q6NZI2 390 aaKnown RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 RFWD3Q6PCD5 774 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 PRR23CQ6ZRP0 262 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 C11orf57Q6ZUT1 292 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 CHST9Q7L1S5 443 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 SLC47A2Q86VL8 602 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 RGL4Q8IZJ4 473 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 CPXM2Q8N436 756 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 DEFB119Q8N690 84 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF557Q8N988 423 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 HJURPQ8NCD3 748 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 TMEM35BQ8NCS4 154 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 NEK11Q8NG66 645 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 ENOX1Q8TC92 643 aaKnown RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 WFIKKN2Q8TEU8 576 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 SHC3Q92529 594 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 PIGKQ92643 395 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 NLRC4Q9NPP4 1024 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 FAM207AQ9NSI2 230 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-210ENST00000528441 DDIT4Q9NX09 232 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 CYP8B1Q9UNU6 501 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 PLA2G4CQ9UP65 541 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 THADAQ6YHU6 1953 aa9.44□□□□□ -0.9
CMTM1-210ENST00000528441 SPAG17Q6Q759 2223 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 MYO18AQ92614 2054 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ATXN2Q99700 1313 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 GOLGA6L7A0A1B0GV03 622 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 PRRT4C9JH25 899 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms