RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MED7O43513 233 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 SYNCRIPO60506 623 aaKnown RBP14.8□□□□□ -0.04
CAPN1-212ENST00000527887 LETM1O95202 739 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-212ENST00000527887 LTFP02788 710 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 PRKCSHP14314 528 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-212ENST00000527887 RPL34P49207 117 aaKnown RBP14.8□□□□□ -0.04
CAPN1-212ENST00000527887 SLC11A2P49281 568 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 IRX4P78413 519 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 ZNF33AQ06730 810 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 NNTQ13423 1086 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 KIAA1211LQ6NV74 962 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 RRAGAQ7L523 313 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 FRMD1Q8N878 549 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 GPT2Q8TD30 523 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 EDEM1Q92611 657 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 KAT5Q92993 513 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 P2RY11Q96G91 374 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 ZNF419Q96HQ0 510 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-212ENST00000527887 DDX50Q9BQ39 737 aaKnown RBP14.8□□□□□ -0.04
CAPN1-212ENST00000527887 SFMBT1Q9UHJ3 866 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 RWDD2AQ9UIY3 292 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 EML5Q05BV3 1969 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 MYOFQ9NZM1 2061 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 CNOT1A5YKK6 2376 aaKnown RBP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 CDX4O14627 284 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 KCNK5O95279 499 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 IGLV3-27P01718 113 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 CSRP1P21291 193 aaKnown RBP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 BRD2P25440 801 aaKnown RBP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 OXTRP30559 389 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 GPD2P43304 727 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 STX17P56962 302 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 ARID5AQ03989 594 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 SYCP2LQ5T4T6 812 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 ARHGEF19Q8IW93 802 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 ZSWIM1Q9BR11 485 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 INTS2Q9H0H0 1204 aaKnown RBP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 PRDM16Q9HAZ2 1276 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 UBE2TQ9NPD8 197 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-212ENST00000527887 ITM2CQ9NQX7 267 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 TMEM74BQ9NUR3 256 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 SUSD2Q9UGT4 822 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 SLC6A14Q9UN76 642 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 PLA2G4CQ9UP65 541 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 NFE2L3Q9Y4A8 694 aa14.79□□□□□ -0.04
CAPN1-212ENST00000527887 PATE3B3GLJ2 98 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 WASH3PC4AMC7 463 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 NDUFS2O75306 463 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 GABBR2O75899 941 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 SERPINF2P08697 491 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 C7P10643 843 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 CEACAM1P13688 526 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 ITPKAP23677 461 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 HOXD9P28356 352 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-212ENST00000527887 IL12RB1P42701 662 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 RGS7P49802 495 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 SHC2P98077 582 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 ZNF234Q14588 700 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 FUT11Q495W5 492 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 N4BP2L1Q5TBK1 243 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-212ENST00000527887 ARMCX6Q7L4S7 300 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 KIAA0907Q7Z7F0 614 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-212ENST00000527887 MLKLQ8NB16 471 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 CADM4Q8NFZ8 388 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 KREMEN1Q96MU8 473 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 SERPINB11Q96P15 392 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 MED15Q96RN5 788 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 CIPCQ9C0C6 399 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 FBRSQ9HAH7 460 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 USP36Q9P275 1121 aaKnown RBP14.78□□□□□ -0.04
CAPN1-212ENST00000527887 CYP8B1Q9UNU6 501 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 RAD54BQ9Y620 910 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 ACACBO00763 2458 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 ABCA7Q8IZY2 2146 aa14.78□□□□□ -0.04
CAPN1-212ENST00000527887 GTPBP10A4D1E9 387 aaKnown RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 UPK3BL1B0FP48 263 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 UPK3BL2E5RIL1 263 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 ACSL4O60488 711 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 ATP5BP06576 529 aaKnown RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 NCAM1P13591 858 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 KRT5P13647 590 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 GNSP15586 552 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 ENGP17813 658 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 PMLP29590 882 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 CD6P30203 668 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 ATXN3P54252 364 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 TBX4P57082 545 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 GFPT1Q06210 699 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 WDR45BQ5MNZ6 344 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 PIK3R6Q5UE93 754 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 KIAA1324Q6UXG2 1013 aaKnown RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 SERPINA13PQ6UXR4 307 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 TMPRSS6Q8IU80 811 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 AHI1Q8N157 1196 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 PRCCQ92733 491 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 SIPA1Q96FS4 1042 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 WSB2Q9NYS7 404 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 ANGPTL2Q9UKU9 493 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 CLEC4EQ9ULY5 219 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms