RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ABCC13Q9NSE7 274 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 HBS1LQ9Y450 684 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 PCDHB4Q9Y5E5 795 aa23.38■■□□□ 1.33
TRAPPC4-208ENST00000527680 SPAARA0A1B0GVQ0 90 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 YJEFN3A6XGL0 299 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 MEI4A8MW99 385 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 C1QTNF9BB2RNN3 333 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 E7ENQ6 273 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 EPHX1P07099 455 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 PROS1P07225 676 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 C1QTNF9P0C862 333 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 RDXP35241 583 aaKnown RBP23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 SIM1P81133 766 aaPredicted RBP23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 EIF4HQ15056 248 aaKnown RBP23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 SERPINA13PQ6UXR4 307 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 METTL3Q86U44 580 aaKnown RBP23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 ZC3H3Q8IXZ2 948 aaKnown RBP23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 ENGASEQ8NFI3 743 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 NT5C1BQ96P26 610 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 SCNM1Q9BWG6 230 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 PLA2G4CQ9UP65 541 aa23.37■■□□□ 1.33
TRAPPC4-208ENST00000527680 SETSIPP0DME0 302 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 NCAM1P13591 858 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 OXTRP30559 389 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 FMO5P49326 533 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 RGS7P49802 495 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 CETN1Q12798 172 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 BECN1Q14457 450 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 UNQ6494/PRO21346Q6UXR6 183 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 BHLHA9Q7RTU4 235 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 KCTD13Q8WZ19 329 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 DHTKD1Q96HY7 919 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 MIR1-1HGQ9H1L0 117 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 CNGB3Q9NQW8 809 aa23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 WSB2Q9NYS7 404 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC4-208ENST00000527680 O00370 1275 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 PIK3R2O00459 728 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 TPMTP51580 245 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 NUCB2P80303 420 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 ENPP2Q13822 863 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 ADGRF1Q5T601 910 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 KLHL10Q6JEL2 608 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 LCLAT1Q6UWP7 414 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 PIP4P1Q86T03 277 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 CACUL1Q86Y37 369 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 FAM217AQ8IXS0 508 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 PPM1KQ8N3J5 372 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 SPATA20Q8TB22 786 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 TIGD1Q96MW7 591 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 ADAM33Q9BZ11 813 aa23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 USP36Q9P275 1121 aaKnown RBP23.35■■□□□ 1.33
TRAPPC4-208ENST00000527680 UPK3BL1B0FP48 263 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 UPK3BL2E5RIL1 263 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 MSI1O43347 362 aaKnown RBP23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 PAEPP09466 180 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 PRKCHP24723 683 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 DAOAP59103 153 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 ZNF445P59923 1031 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 FNDC3BQ53EP0 1204 aaKnown RBP23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 TMEM215Q68D42 235 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 TFAP2BQ92481 460 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 GOLGA1Q92805 767 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 CEP63Q96MT8 703 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 NUP58Q9BVL2 599 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 PCDHB9Q9Y5E1 797 aa23.34■■□□□ 1.33
TRAPPC4-208ENST00000527680 KCNJ18B7U540 433 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 HLA-EP13747 358 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 HOXD9P28356 352 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 CNGA2Q16280 664 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 PMF1Q6P1K2 205 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 CHST9Q7L1S5 443 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 FAM124AQ86V42 546 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 CADM4Q8NFZ8 388 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 CYB5D2Q8WUJ1 264 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 WASF3Q9UPY6 502 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 GTF3C3Q9Y5Q9 886 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 CACNA1EQ15878 2313 aa23.33■■□□□ 1.33
TRAPPC4-208ENST00000527680 A0A1B0GTW7 788 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 M0QYV0 167 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 RNF225M0QZC1 329 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 HYAL3O43820 417 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 HLA-FP30511 346 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 PPP1R2P41236 205 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 PKDCCQ504Y2 493 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 DCAF12L1Q5VU92 463 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 UNC45BQ8IWX7 931 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 UBR7Q8N806 425 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 WFIKKN2Q8TEU8 576 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 SLC35F5Q8WV83 523 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 ABCB8Q9NUT2 735 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 DNAAF2Q9NVR5 837 aaKnown RBP23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 MAN1B1Q9UKM7 699 aa23.32■■□□□ 1.32
TRAPPC4-208ENST00000527680 LATS1O95835 1130 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 CD59P13987 128 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 CD44P16070 742 aaKnown RBP23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 BRD2P25440 801 aaKnown RBP23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 SLC11A2P49281 568 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 COPAP53621 1224 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 SLC14A1Q13336 389 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 HNRNPDQ14103 355 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms