RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 OTUD1Q5VV17 481 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 ZDHHC24Q6UX98 284 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 SYDE1Q6ZW31 735 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 BEND5Q7L4P6 421 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 ITIH5Q86UX2 942 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 ARHGAP18Q8N392 663 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 TRMT2BQ96GJ1 504 aaKnown RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 TRIM62Q9BVG3 475 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 PRRC2BQ5JSZ5 2229 aaKnown RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 DOCK6Q96HP0 2047 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 COL4A4P53420 1690 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 hCG_1818297A0A087WSY0 165 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 SYNJ2BP-COX16A0A087WUM0 186 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 M0QYT0 321 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 CCL16O15467 120 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 OPA1O60313 960 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 ZDHHC11BP0C7U3 371 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 DUSP6Q16828 381 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 FBXO25Q8TCJ0 367 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 FAM118BQ9BPY3 351 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 CLIC5Q9NZA1 410 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 COX16Q9P0S2 106 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 ASB3Q9Y575 518 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 C3orf70A6NLC5 250 aaPredicted RBP19.49■□□□□ 0.71
SMPD1-203ENST00000527275 RNF40O75150 1001 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 TRUB2O95900 331 aaKnown RBP19.49■□□□□ 0.71
SMPD1-203ENST00000527275 PCK1P35558 622 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 HSD17B3P37058 310 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 PSEN1P49768 467 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 DHX9Q08211 1270 aaKnown RBP19.49■□□□□ 0.71
SMPD1-203ENST00000527275 NME3Q13232 169 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 TMC3Q7Z5M5 1100 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 CCDC114Q96M63 670 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 USP18Q9UMW8 372 aa19.49■□□□□ 0.71
SMPD1-203ENST00000527275 GAS8O95995 478 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 DESP17661 470 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 KDELR1P24390 212 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 ZNF697Q5TEC3 545 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 SCYL2Q6P3W7 929 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 STRADAQ7RTN6 431 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 BNIPLQ7Z465 357 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 DQX1Q8TE96 717 aaKnown RBP19.48■□□□□ 0.71
SMPD1-203ENST00000527275 SH3GL2Q99962 352 aa19.48■□□□□ 0.71
SMPD1-203ENST00000527275 ZNF334Q9HCZ1 680 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-203ENST00000527275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMPD1-203ENST00000527275 ZNF840PA6NDX5 716 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TBX18O95935 607 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 RARGP13631 454 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 GYS2P54840 703 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TERF2Q15554 542 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 RTL10Q7L3V2 364 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 KCTD6Q8NC69 237 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 CMASQ8NFW8 434 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-203ENST00000527275 RNF139Q8WU17 664 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TTYH1Q9H313 450 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-203ENST00000527275 PIGVQ9NUD9 493 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 DDIT4Q9NX09 232 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 RRN3Q9NYV6 651 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 SFMBT1Q9UHJ3 866 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 C5orf42Q9H799 3197 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 PTK6Q13882 451 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 UAP1Q16222 522 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TMEM150AQ86TG1 271 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TAC4Q86UU9 113 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 ELMOD1Q8N336 334 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 PDZD8Q8NEN9 1154 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 OVCA2Q8WZ82 227 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 CASP10Q92851 521 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 ART4Q93070 314 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 PEBP4Q96S96 227 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 PRDM12Q9H4Q4 367 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 CCSER2Q9H7U1 834 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 IL21Q9HBE4 155 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TRPM5Q9NZQ8 1165 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 UXTQ9UBK9 157 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-203ENST00000527275 ASIC3Q9UHC3 531 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 DPP7Q9UHL4 492 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 EFR3BQ9Y2G0 817 aa19.47■□□□□ 0.71
SMPD1-203ENST00000527275 TLR5O60602 858 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 PPFIA2O75334 1257 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 ENDOD1O94919 500 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 DEUP1Q05D60 604 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 CALCOCO2Q13137 446 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 KCNC3Q14003 757 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 SNX30Q5VWJ9 437 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 FAM131BQ86XD5 332 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 HS6ST3Q8IZP7 471 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 VN1R2Q8NFZ6 395 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 UBLCP1Q8WVY7 318 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 LRRC3Q9BY71 257 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 IGFLR1Q9H665 355 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 FAM204AQ9H8W3 233 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 HCFC1R1Q9NWW0 138 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 WHRNQ9P202 907 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 MTRF1LQ9UGC7 380 aaKnown RBP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 PLAAQ9Y263 795 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 LIASO43766 372 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 PRPSAP2O60256 369 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 RDXP35241 583 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms