RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 CD27P26842 260 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CTSKP43235 329 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 ASPAP45381 313 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 PSEN1P49768 467 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 KIF11P52732 1056 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CLDN10P78369 228 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 AMPD3Q01432 767 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 SGSM1Q2NKQ1 1148 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 LRRC69Q6ZNQ3 347 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CCDC186Q7Z3E2 898 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 FCRL3Q96P31 734 aaPredicted RBP13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CDK5RAP1Q96SZ6 601 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 SLC2A11Q9BYW1 496 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 PNPLA8Q9NP80 782 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CLIC5Q9NZA1 410 aa13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CGNQ9P2M7 1197 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 TFIP11Q9UBB9 837 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-207ENST00000527133 CBX4O00257 560 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 ENC1O14682 589 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 RRP8O43159 456 aaKnown RBP13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 TSPAN3O60637 253 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 PDCP20941 246 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 CASP1P29466 404 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 HNF1BP35680 557 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 BCAT1P54687 386 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 C21orf59P57076 290 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 RPS14P62263 151 aaKnown RBP13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 DLG4P78352 724 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 KNOP1Q1ED39 458 aaKnown RBP13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 PRAMEF14Q5SWL7 426 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 ZNF605Q86T29 641 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 GATAD2AQ86YP4 633 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 CPXM2Q8N436 756 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 TMEM245Q9H330 911 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 CUEDC2Q9H467 287 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 SLC39A2Q9NP94 309 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 MORC2Q9Y6X9 1032 aaPredicted RBP13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 MUC22E2RYF6 1773 aaPredicted RBP13.62□□□□□ -0.23
CLNS1A-207ENST00000527133 A0A1B0GTQ1 180 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 SLC12A8A0AV02 714 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 ASS1P00966 412 aaKnown RBP13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 DNTTP04053 509 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 RPN1P04843 607 aaKnown RBP13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 PIK3CAP42336 1068 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 EHHADHQ08426 723 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 TARDBPQ13148 414 aaKnown RBP eCLIP13.61□□□□□ -0.231e-13■■■■■ 43.4
CLNS1A-207ENST00000527133 DNAJC3Q13217 504 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 ZACNQ401N2 412 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 RSRC2Q7L4I2 434 aaKnown RBP13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 ZNF843Q8N446 348 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 TAF4BQ92750 862 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 CNDP2Q96KP4 475 aaKnown RBP13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 C7orf25Q9BPX7 421 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 ORAI3Q9BRQ5 295 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 ACE2Q9BYF1 805 aaPredicted RBP13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 MARCH2Q9P0N8 246 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 PLA2G4CQ9UP65 541 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 PCDHGA1Q9Y5H4 931 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 USP3Q9Y6I4 520 aa13.61□□□□□ -0.23
CLNS1A-207ENST00000527133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 FAM47DPA6NHR8 397 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 PAPSS1O43252 624 aaPredicted RBP13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 DFNA5O60443 496 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 RFPL3O75679 317 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 LDOC1O95751 146 aaPredicted RBP13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 CD58P19256 250 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 HOXD9P28356 352 aaPredicted RBP13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 HLA-FP30511 346 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 ZBTB16Q05516 673 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 INCA1Q0VD86 236 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 STK38Q15208 465 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 TTC31Q49AM3 519 aaPredicted RBP13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 GOLGA5Q8TBA6 731 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 BAP1Q92560 729 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 SLC6A18Q96N87 628 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 ARID3AQ99856 593 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 PRSS16Q9NQE7 514 aa13.6□□□□□ -0.23
CLNS1A-207ENST00000527133 VILLO15195 856 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 HLA-DRAP01903 254 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 IGHV4-34P06331 123 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 ITGAVP06756 1048 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 ABCB4P21439 1286 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms