RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TDRD9Q8NDG6 1382 aaKnown RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 LOC105369274A0A096LPK9 316 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 LOC102723532A0A0G2JNH3 316 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 A0A1W2PS29 197 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SAC3D1A6NKF1 404 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SLC38A8A6NNN8 435 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 KIF28PB7ZC32 967 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 STX16-NPEPL1H3BU86 382 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 STX16O14662 325 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 TSPAN3O60637 253 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 LARGE1O95461 756 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 CDK4P11802 303 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ZNF37AP17032 561 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ITGALP20701 1170 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 RBL1P28749 1068 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 GATMP50440 423 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 PRKAG1P54619 331 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 MTAPQ13126 283 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 DYRK1AQ13627 763 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 DCTN1Q14203 1278 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 E2F2Q14209 437 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 CSHL1Q14406 222 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 MEA1Q16626 185 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 TSTQ16762 297 aaKnown RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 PRICKLE4Q2TBC4 344 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 WDR45BQ5MNZ6 344 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ARHGAP40Q5TG30 622 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 FAM205BPQ63HN1 556 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SP5Q6BEB4 398 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SFRP4Q6FHJ7 346 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ITPRIPL1Q6GPH6 555 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ANO7Q6IWH7 933 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 RGS7BPQ6MZT1 257 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 PIK3AP1Q6ZUJ8 805 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SLC15A3Q8IY34 581 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 OR4N4Q8N0Y3 316 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 TBC1D22AQ8WUA7 517 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 TMEM171Q8WVE6 324 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SNX19Q92543 992 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ZBTB45Q96K62 511 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-211ENST00000525970 OSBPL9Q96SU4 736 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 R3HDMLQ9H3Y0 253 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 RXFP3Q9NSD7 469 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ARHGAP26Q9UNA1 814 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 USP22Q9UPT9 525 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 ZBTB1Q9Y2K1 713 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 SLC27A6Q9Y2P4 619 aa5.09□□□□□ -1.59
CSDE1-211ENST00000525970 TMCC2O75069 709 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 GATA3P23771 443 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 RAD52P43351 418 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 TIRAPP58753 221 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 NUCB1Q02818 461 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 SF3A3Q12874 501 aaKnown RBP eCLIP5.08□□□□□ -1.6
CSDE1-211ENST00000525970 ERV3-1Q14264 604 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 KRT32Q14532 448 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 HLXQ14774 488 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-211ENST00000525970 RPS6KA2Q15349 733 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 ZNF484Q5JVG2 852 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 GALNT5Q7Z7M9 940 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 ABRAQ8N0Z2 381 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 OR8H2Q8N162 312 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 SSH3Q8TE77 659 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 CREB3L4Q8TEY5 395 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 AIFM2Q9BRQ8 373 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 PHF7Q9BWX1 381 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-211ENST00000525970 BRD8Q9H0E9 1235 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 KCNK9Q9NPC2 374 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 INTS13Q9NVM9 706 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 ORC3Q9UBD5 711 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-211ENST00000525970 CNPY2Q9Y2B0 182 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 TTLL3Q9Y4R7 772 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 SNX14Q9Y5W7 946 aa5.08□□□□□ -1.6
CSDE1-211ENST00000525970 SPATA31A6Q5VVP1 1343 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 FSD2A1L4K1 749 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 PI4KAP2A4QPH2 592 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 F5H697 171 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 CTIFO43310 598 aaKnown RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 ZBED4O75132 1171 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 ABCD3P28288 659 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 ADORA2AP29274 412 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 EPHA3P29320 983 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 PSMC2P35998 433 aaKnown RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 NDUFV1P49821 464 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 PDE6CP51160 858 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 RBM5P52756 815 aaKnown RBP eCLIP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 CLNS1AP54105 237 aaKnown RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 ELLP55199 621 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 KRTAP10-11P60412 298 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 MPP3Q13368 585 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 SF3B3Q15393 1217 aaKnown RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 FAM90A2PQ658T7 463 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 FBXO42Q6P3S6 717 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 MICALCLQ6ZW33 695 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 ADGRG5Q8IZF4 528 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 METTL25Q8N6Q8 603 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 SLC2A12Q8TD20 617 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 SLC22A17Q8WUG5 538 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 HMGB4Q8WW32 186 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 FUBP1Q96AE4 644 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms