RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 HIST1H2AAQ96QV6 131 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 COLEC11Q9BWP8 271 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 VN1R3Q9BXE9 311 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 NLRC4Q9NPP4 1024 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 HEYLQ9NQ87 328 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 MYO1AQ9UBC5 1043 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 MGAT4CQ9UBM8 478 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 RGS17Q9UGC6 210 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 CAPN11Q9UMQ6 739 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 MAN2B2Q9Y2E5 1009 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 SQORQ9Y6N5 450 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 TROQ12816 1431 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 SPATA31E1Q6ZUB1 1445 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 MAGI1Q96QZ7 1491 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 IFT140Q96RY7 1462 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 ADAMTS12P58397 1594 aa3.07□□□□□ -1.92
ECHDC1-218ENST00000525745 FAM90A10PA6NDY2 464 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CD8B2A6NJW9 211 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 RASA4BC9J798 803 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 M0R3H8 397 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CD3EAPO15446 510 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 RASA4O43374 803 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 SPRY2O43597 315 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 NCK2O43639 380 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CREB3O43889 395 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 TMPRSS11DO60235 418 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 LDHAP00338 332 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 MYL4P12829 197 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 HGFP14210 728 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CD19P15391 556 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 TSHRP16473 764 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ATICP31939 592 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CCKARP32238 428 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 TM4SF4P48230 202 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 TIRAPP58753 221 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 BECN1Q14457 450 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 BRD3Q15059 726 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 IZUMO3Q5VZ72 239 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ANO7Q6IWH7 933 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 VSTM1Q6UX27 236 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CLEC9AQ6UXN8 241 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 SKAP1Q86WV1 359 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 SMC5Q8IY18 1101 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 OR2C3Q8N628 320 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ZNF566Q969W8 418 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CTHRC1Q96CG8 243 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 VCPIP1Q96JH7 1222 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 NEURL4Q96JN8 1562 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ZNF668Q96K58 619 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 USP47Q96K76 1375 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 SNX27Q96L92 541 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ANKRD30BQ9BXX2 1392 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 EIF2AQ9BY44 585 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 MAGEB5Q9BZ81 275 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ZCWPW1Q9H0M4 648 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ZNF700Q9H0M5 742 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 ZBTB26Q9HCK0 441 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 POT1Q9NUX5 634 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 TMOD4Q9NZQ9 345 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 FNIP2Q9P278 1114 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 NKX1-2Q9UD57 310 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 MAPK8IP3Q9UPT6 1336 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 HPSEQ9Y251 543 aa3.06□□□□□ -1.92
ECHDC1-218ENST00000525745 CROCC2H7BZ55 1655 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 KIAA0556O60303 1618 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 ARHGEF5Q12774 1597 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 CLASP1Q7Z460 1538 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 KDM5BQ9UGL1 1544 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 LRPPRCP42704 1394 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 DHX29Q7Z478 1369 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 ZMYM2Q9UBW7 1377 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 NPC1L1Q9UHC9 1359 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 A0A1W2PPC4 97 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 CLCA1A8K7I4 914 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 CLIC1O00299 241 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 EXOC5O00471 708 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 CCNT2O60583 730 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 TLR2O60603 784 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 ALPLP05186 524 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 PSG1P11464 419 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 HARSP12081 509 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 YY1P25490 414 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 COPAP53621 1224 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 YPEL5P62699 121 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 BTKQ06187 659 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 OS9Q13438 667 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 MFSD13AQ14CX5 517 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 TWIST1Q15672 202 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 MIDNQ504T8 468 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 MANEALQ5VSG8 457 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 KIAA1161Q6NSJ0 714 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 CENPQQ7L2Z9 268 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 LINC01465Q8N7H1 131 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 C11orf44Q8N8P7 122 aa3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 NGDNQ8NEJ9 315 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 ZNF548Q8NEK5 533 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-218ENST00000525745 GJA10Q969M2 543 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms