RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MRPS31Q92665 395 aaKnown RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 ACSF2Q96CM8 615 aaPredicted RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 CHFRQ96EP1 664 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SLC39A13Q96H72 371 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CEP295NLQ96MC4 621 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SELENOOQ9BVL4 669 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 NUP85Q9BW27 656 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 SLITRK6Q9H5Y7 841 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 POPDC2Q9HBU9 364 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ASNSD1Q9NWL6 643 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.76□□□□□ -1.33
CD44-214ENST00000525211 CLIC5Q9NZA1 410 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 MARCH2Q9P0N8 246 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CFAP97Q9P2B7 532 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 THEGQ9P2T0 379 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 UXTQ9UBK9 157 aaPredicted RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 WNT6Q9Y6F9 365 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 NUMBLQ9Y6R0 609 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TRAV19A0A0A6YYK7 116 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 GRID2IPA4D2P6 1211 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 FAM72CH0Y354 149 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 M0QYT0 321 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 GFRA2O00451 464 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ZNF197O14709 1029 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 TRIM24O15164 1050 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 FANCGO15287 622 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 PJA2O43164 708 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 BUB1BO60566 1050 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 HSF2BPO75031 334 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ENDOD1O94919 500 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 MOCS3O95396 460 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 MOCS2O96007 188 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 PTMAP06454 111 aaKnown RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 CKMP06732 381 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 SRGAP2BP0DMP2 458 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 GPD1P21695 349 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CORO1AP31146 461 aaKnown RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 SLC6A4P31645 630 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CTHP32929 405 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 NOS2P35228 1153 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CYLC1P35663 651 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 ATP5C1P36542 298 aaKnown RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 SCNN1AP37088 669 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 MARCKSL1P49006 195 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 NUMBP49757 651 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 TUBP50607 506 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 VAV2P52735 878 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CCDC173Q0VFZ6 552 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 AAK1Q2M2I8 961 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 FAM72AQ5TYM5 149 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 PIK3R6Q5UE93 754 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 FAM72DQ6L9T8 149 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 RFWD3Q6PCD5 774 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 Q6ZNB5 142 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 FAM72BQ86X60 149 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CIR1Q86X95 450 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 NETO2Q8NC67 525 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 PDZD8Q8NEN9 1154 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ZNF564Q8TBZ8 553 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 FAM172AQ8WUF8 416 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CENPIQ92674 756 aaPredicted RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 SMARCD2Q92925 531 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 VCPIP1Q96JH7 1222 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 NOX5Q96PH1 765 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ASB2Q96Q27 587 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 DNAI2Q9GZS0 605 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 TRPV4Q9HBA0 871 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 HPS4Q9NQG7 708 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ABCC13Q9NSE7 274 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 TDP1Q9NUW8 608 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 DDIT4Q9NX09 232 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 TRMT1Q9NXH9 659 aaKnown RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 EPS15L1Q9UBC2 864 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 DPP7Q9UHL4 492 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 DNMT3LQ9UJW3 386 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ANAPC7Q9UJX3 599 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 AGO1Q9UL18 857 aaKnown RBP6.75□□□□□ -1.33
CD44-214ENST00000525211 CLEC4EQ9ULY5 219 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 ARHGAP26Q9UNA1 814 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 NEU3Q9UQ49 428 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 PPP2R2CQ9Y2T4 447 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 MYOFQ9NZM1 2061 aa6.75□□□□□ -1.33
CD44-214ENST00000525211 KCNU1A8MYU2 1149 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ARNTLO00327 626 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ARHGAP6O43182 974 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 TSPAN3O60637 253 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 LRCH4O75427 683 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 MTA2O94776 668 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 GLI1P08151 1106 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 CCNYL3P0C7X3 344 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 RALAP11233 206 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 PSMA2P25787 234 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 MIPP30301 263 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 PTPN9P43378 593 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 SOX9P48436 509 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 CXCR3P49682 368 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms