RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ENDOD1O94919 500 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 GJB6O95452 261 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 SKILP12757 684 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 HOXD9P28356 352 aaPredicted RBP12.43□□□□□ -0.42
CLN8-207ENST00000524258 HNRNPH3P31942 346 aaKnown RBP12.43□□□□□ -0.42
CLN8-207ENST00000524258 CHKAP35790 457 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 HARS2P49590 506 aaKnown RBP12.43□□□□□ -0.42
CLN8-207ENST00000524258 SNX16P57768 344 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 ZBED6P86452 979 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 LRRC32Q14392 662 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 ASIC2Q16515 512 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 PIK3R6Q5UE93 754 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 SFMBT2Q5VUG0 894 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 NUGGCQ68CJ6 796 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 ACAD10Q6JQN1 1059 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 KIAA0907Q7Z7F0 614 aaPredicted RBP12.43□□□□□ -0.42
CLN8-207ENST00000524258 VSTM4Q8IW00 320 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 UNC45BQ8IWX7 931 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 MCOLN2Q8IZK6 566 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 JOSD2Q8TAC2 188 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 USP33Q8TEY7 942 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 LMLNQ96KR4 655 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 PNKPQ96T60 521 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 PRRX2Q99811 253 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
CLN8-207ENST00000524258 C11orf70Q9BRQ4 267 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 IER2Q9BTL4 223 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 BBS2Q9BXC9 721 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 PLK2Q9NYY3 685 aa12.43□□□□□ -0.42
CLN8-207ENST00000524258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLN8-207ENST00000524258 MYO15AQ9UKN7 3530 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 C2CD4BA6NLJ0 364 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 PRRT4C9JH25 899 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 NEDD8-MDP1E9PL57 170 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 H0Y858 1186 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 CAPN9O14815 690 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 RNF40O75150 1001 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 KAT7O95251 611 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 SP9P0CG40 484 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 GRIA2P42262 883 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 TNFRSF4P43489 277 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 CXCR3P49682 368 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 CDK17Q00537 523 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 SATB1Q01826 763 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 TBX2Q13207 712 aaPredicted RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 ANO4Q32M45 955 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 SLC25A52Q3SY17 297 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 FBXO43Q4G163 708 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 FAM102AQ5T9C2 384 aaPredicted RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 EMC10Q5UCC4 262 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 RFWD3Q6PCD5 774 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 DNAAF5Q86Y56 855 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 TERB1Q8NA31 727 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 IQCDQ96DY2 449 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 PRICKLE1Q96MT3 831 aaPredicted RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 TBCBQ99426 244 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 NUCKS1Q9H1E3 243 aaKnown RBP12.42□□□□□ -0.42
CLN8-207ENST00000524258 SYNCQ9H7C4 482 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 ARHGEF4Q9NR80 690 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 PIGVQ9NUD9 493 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 RRN3Q9NYV6 651 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 ADAM22Q9P0K1 906 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 FBXO4Q9UKT5 387 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 NENFQ9UMX5 172 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 SLC27A6Q9Y2P4 619 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 HCN4Q9Y3Q4 1203 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 ATG2BQ96BY7 2078 aa12.42□□□□□ -0.42
CLN8-207ENST00000524258 GOLGA8SH3BPF8 625 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 TSPAN3O60637 253 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ADCY5O95622 1261 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 PLEKP08567 350 aaPredicted RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 GZMAP12544 262 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 HNRNPLP14866 589 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLN8-207ENST00000524258 CASP14P31944 242 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 PTPN5P54829 565 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 RNASE9P60153 205 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 NHLH1Q02575 133 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 KDSRQ06136 332 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 KLHL30Q0D2K2 578 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ZNF528Q3MIS6 628 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 CCDC14Q49A88 953 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 MPPE1Q53F39 396 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 MS4A13Q5J8X5 152 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 MPP7Q5T2T1 576 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 TMEM215Q68D42 235 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 SPECC1LQ69YQ0 1117 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ZNF683Q8IZ20 524 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 EMC1Q8N766 993 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms