RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ACAD10Q6JQN1 1059 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 TPGS1Q6ZTW0 290 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 MON1BQ7L1V2 547 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 VPS36Q86VN1 386 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 PHTF2Q8N3S3 785 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 ATP6V0D2Q8N8Y2 350 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 PRSS33Q8NF86 280 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 NT5C3BQ969T7 300 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 BTN2A3PQ96KV6 586 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 SLC2A11Q9BYW1 496 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 ARHGEF4Q9NR80 690 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 DDIT4Q9NX09 232 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 TMEM59LQ9UK28 342 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 GOLGA8SH3BPF8 625 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 M0QYT0 321 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 KAT7O95251 611 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 PAPSS2O95340 614 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 SERPING1P05155 500 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 ABCB4P21439 1286 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 TNFRSF4P43489 277 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 MRPS21P82921 87 aaKnown RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 MTAPQ13126 283 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 E2F5Q15329 346 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 ANGPT1Q15389 498 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 ZNF528Q3MIS6 628 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 SLC25A52Q3SY17 297 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 BRMS1LQ5PSV4 323 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 E4F1Q66K89 784 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.324e-9■■□□□ 11.9
VEGFA-225ENST00000523950 C12orf40Q86WS4 652 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 VSTM4Q8IW00 320 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 TERB1Q8NA31 727 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 C3orf20Q8ND61 904 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 SLC30A5Q8TAD4 765 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 ACDQ96AP0 544 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 FBRSL1Q9HCM7 1045 aaKnown RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 PRMT8Q9NR22 394 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 METTL5Q9NRN9 209 aaKnown RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 DNAJC17Q9NVM6 304 aaKnown RBP13.04□□□□□ -0.32
VEGFA-225ENST00000523950 FBXO10Q9UK96 956 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 SLC27A6Q9Y2P4 619 aa13.04□□□□□ -0.32
VEGFA-225ENST00000523950 KCNU1A8MYU2 1149 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 RNF40O75150 1001 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 CXCL12P48061 93 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 SLC6A11P48066 632 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 DGKGP49619 791 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 SULT1E1P49888 294 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 PITX1P78337 314 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 TCF15Q12870 199 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 GAS6Q14393 721 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 FAM133BQ5BKY9 247 aaKnown RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 ZNF571Q7Z3V5 609 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 DRC7Q8IY82 874 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 TRIM11Q96F44 468 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 SELENOOQ9BVL4 669 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 FAM126AQ9BYI3 521 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-225ENST00000523950 STARD13Q9Y3M8 1113 aa13.03□□□□□ -0.32
VEGFA-225ENST00000523950 ANKRD62A6NC57 917 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 K7EQS6 105 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 RTN2O75298 545 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 KRT3P12035 628 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 HOXD9P28356 352 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-225ENST00000523950 SDC4P31431 198 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 CASP14P31944 242 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.33
VEGFA-225ENST00000523950 FLT3P36888 993 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 CXCR3P49682 368 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 DEUP1Q05D60 604 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 KDSRQ06136 332 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 NME3Q13232 169 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 C2CD6Q53TS8 623 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 PIK3R6Q5UE93 754 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 TTC39BQ5VTQ0 682 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-225ENST00000523950 OTUD1Q5VV17 481 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-225ENST00000523950 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 RNF43Q68DV7 783 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 DNAJC24Q6P3W2 148 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 Q6ZS52 159 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 STRADAQ7RTN6 431 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 BNIPLQ7Z465 357 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms