RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-224ENST00000523873 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 RFWD3Q6PCD5 774 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 SFTPA1Q8IWL2 248 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 SUGP1Q8IWZ8 645 aaKnown RBP13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 C3orf20Q8ND61 904 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 RNF34Q969K3 372 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ZNF653Q96CK0 615 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 BBS2Q9BXC9 721 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ANLNQ9NQW6 1124 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 PIGVQ9NUD9 493 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 STAP1Q9ULZ2 295 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 CACNA1IQ9P0X4 2223 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ZDBF2Q9HCK1 2354 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 C2CD4BA6NLJ0 364 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 APOEP02649 317 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 GZMAP12544 262 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 TYRP14679 529 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 AOC1P19801 751 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 GPD1P21695 349 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 GBP1P32455 592 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 GGCXP38435 758 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 MLLT6P55198 1093 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-224ENST00000523873 RPL7AP62424 266 aaKnown RBP13.32□□□□□ -0.28
VEGFA-224ENST00000523873 OGDHQ02218 1023 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 DEUP1Q05D60 604 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 SLC25A52Q3SY17 297 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CCDC14Q49A88 953 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 FAM133BQ5BKY9 247 aaKnown RBP13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 NUGGCQ68CJ6 796 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 VPS36Q86VN1 386 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CNGA4Q8IV77 575 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 FAM217AQ8IXS0 508 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 DRC7Q8IY82 874 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CPXM2Q8N436 756 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 EZH1Q92800 747 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CD101Q93033 1021 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 MCEEQ96PE7 176 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 ISCUQ9H1K1 167 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 LMAN1LQ9HAT1 526 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
VEGFA-224ENST00000523873 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CNOT8Q9UFF9 292 aaKnown RBP13.32□□□□□ -0.28
VEGFA-224ENST00000523873 CLEC4EQ9ULY5 219 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 NENFQ9UMX5 172 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 SIT1Q9Y3P8 196 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 SNX10Q9Y5X0 201 aa13.32□□□□□ -0.28
VEGFA-224ENST00000523873 KCNU1A8MYU2 1149 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 I6L893 689 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 HOXC11O43248 304 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 CCP110O43303 1012 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 CHRNB1P11230 501 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 PDGFRAP16234 1089 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 AVPR2P30518 371 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 SDC4P31431 198 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 SLC11A2P49281 568 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 MAMLD1Q13495 774 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 ASTE1Q2TB18 679 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 TMEM196Q5HYL7 178 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 PIK3R6Q5UE93 754 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 Q6ZS52 159 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 ARCQ7LC44 396 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 NT5C3BQ969T7 300 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 MSANTD3Q96H12 275 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 PACSIN1Q9BY11 444 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 TRIM7Q9C029 511 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 THAP2Q9H0W7 228 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.282e-7■■■■□ 22.2
VEGFA-224ENST00000523873 STOML2Q9UJZ1 356 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 MRPS17Q9Y2R5 130 aaKnown RBP13.31□□□□□ -0.28
VEGFA-224ENST00000523873 TRIOO75962 3097 aa13.31□□□□□ -0.28
VEGFA-224ENST00000523873 NYNRINQ9P2P1 1898 aaKnown RBP13.3□□□□□ -0.28
VEGFA-224ENST00000523873 SSU72P8A0A1W2PR75 194 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 GFRA2O00451 464 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 TULP3O75386 442 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 LATS1O95835 1130 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 PENKP01210 267 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-224ENST00000523873 CCR1P32246 355 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms